RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 TNFRSF9Q07011 255 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 TIGITQ495A1 244 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 C2orf83Q53S99 150 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 CASC10Q5T4H9 136 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 PRSS54Q6PEW0 395 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 TMED4Q7Z7H5 227 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 APRG1Q8IVJ8 170 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 SGPP2Q8IWX5 399 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 TOMM5Q8N4H5 51 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 OR1L6Q8NGR2 347 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 OR4X1Q8NH49 305 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 IL22RA2Q969J5 263 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 MARC2Q969Z3 335 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 TXN2Q99757 166 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 C20orf24Q9BUV8 137 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 RHPN1-AS1Q9BWJ2 59 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 RBKSQ9H477 322 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 VSIRQ9H7M9 311 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 PALMDQ9NP74 551 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 DAZ1Q9NQZ3 744 aaKnown RBP3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 SHPKQ9UHJ6 478 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 UFC1Q9Y3C8 167 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 PUS1Q9Y606 427 aaKnown RBP eCLIP3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 DNAH6Q9C0G6 4158 aa3.66□□□□□ -1.82
GCSHP4-201ENST00000538792 IGKV3-7A0A075B6H7 116 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 IGKV1OR2-108A0A075B7D4 117 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 TRAV14DV4A0A0A6YYC5 116 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 TRAV25A0A0B4J276 109 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 CEBPZOSA8MTT3 80 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 GNG7O60262 68 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 ADAP1O75689 374 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 DFFBO76075 338 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 YIF1AO95070 293 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 NDUFB6O95139 128 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SFT2D2O95562 160 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SULT1A3P0DMM9 295 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SULT1A4P0DMN0 295 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 IAPPP10997 89 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 IL7P13232 177 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SNCAP37840 140 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 RND2P52198 227 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 UBE2MP61081 183 aaKnown RBP3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SMCO1Q147U7 214 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 USF2Q15853 346 aaPredicted RBP3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 TMEM128Q5BJH2 165 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 LRTM2Q8N967 370 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 OR52B4Q8NGK2 314 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 MUC7Q8TAX7 377 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 SPAG8Q99932 426 aaPredicted RBP3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 OVOL2Q9BRP0 275 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 TUBA4BQ9H853 241 aa3.65□□□□□ -1.83
GCSHP4-201ENST00000538792 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 CYB5BO43169 146 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 CCNKO75909 580 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 ATG12O94817 140 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 GIG44P09565 113 aaPredicted RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 NPY1RP25929 384 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 CRYBB3P26998 211 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 S100A5P33763 92 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 OPRK1P41145 380 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 HTR2BP41595 481 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 NPBWR1P48145 328 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 TFPI2P48307 235 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 PAX9P55771 341 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 IFITM3Q01628 133 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 ZNF90Q03938 601 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 DHRS2Q13268 280 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 GAMTQ14353 236 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 SPANXN2Q5MJ10 180 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 ZFAND6Q6FIF0 208 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 ZNF600Q6ZNG1 722 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 RBPMS2Q6ZRY4 209 aaKnown RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 TCF24Q7RTU0 167 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 LGI3Q8N145 548 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 CENPSQ8N2Z9 138 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 DUSP18Q8NEJ0 188 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 RNASE11Q8TAA1 199 aaKnown RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 DTD1Q8TEA8 209 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 SLC25A21Q9BQT8 299 aaPredicted RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 MS4A6AQ9H2W1 248 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 TBC1D24Q9ULP9 559 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 KCNIP3Q9Y2W7 256 aa3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
GCSHP4-201ENST00000538792 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 LOC102724200A0A096LPH7 203 aaPredicted RBP3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 C3orf84H3BNL1 204 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 K7EQG2 157 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 OR4E1P0C645 316 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 SLC25A6P12236 298 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 RPL35AP18077 110 aaKnown RBP3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 OR10J1P30954 320 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 FAUP35544 74 aaKnown RBP3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 SUB1P53999 127 aaKnown RBP eCLIP3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 AP3S2P59780 193 aa3.63□□□□□ -1.83
GCSHP4-201ENST00000538792 DEFB1P60022 68 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms