RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CLEC3BP05452 202 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 FABP9Q0Z7S8 132 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
ATL3-203ENST00000538786 IGHG2P01859 326 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 TRGC1P0CF51 173 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 PLA2G2AP14555 144 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 S100A7P31151 101 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 FMC1Q96HJ9 113 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.56
ATL3-203ENST00000538786 ABCA1O95477 2261 aa11.52□□□□□ -0.56
ATL3-203ENST00000538786 BMPR1BO00238 502 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 AKR1D1P51857 326 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 RPEL1Q2QD12 228 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 IBA57Q5T440 356 aaKnown RBP11.52□□□□□ -0.57
ATL3-203ENST00000538786 LURAP1LQ8IV03 231 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 CMTM2Q8TAZ6 248 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 ATP6V0BQ99437 205 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 RABAC1Q9UI14 185 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.57
ATL3-203ENST00000538786 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 NDUFA6P56556 154 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 Q5PR19 223 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 SIGLEC15Q6ZMC9 328 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 GPR82Q96P67 336 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 FBN2P35556 2912 aa11.51□□□□□ -0.57
ATL3-203ENST00000538786 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
ATL3-203ENST00000538786 PDE6HQ13956 83 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 CLEC19AQ6UXS0 136 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 FAM231DQ6ZW35 169 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 C17orf77Q96MU5 243 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
ATL3-203ENST00000538786 J3QKU1 62 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 BRI3O95415 125 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 LTAP01374 205 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 DOPEY2Q9Y3R5 2298 aa11.5□□□□□ -0.57
ATL3-203ENST00000538786 H3BUA1 57 aa11.49□□□□□ -0.57
ATL3-203ENST00000538786 HOXA5P20719 270 aa11.49□□□□□ -0.57
ATL3-203ENST00000538786 RPL15P61313 204 aaKnown RBP11.49□□□□□ -0.57
ATL3-203ENST00000538786 MBD6Q96DN6 1003 aa11.49□□□□□ -0.57
ATL3-203ENST00000538786 MLST8Q9BVC4 326 aa11.49□□□□□ -0.57
ATL3-203ENST00000538786 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
ATL3-203ENST00000538786 TRGV3P03979 118 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 PPIFP30405 207 aaKnown RBP11.48□□□□□ -0.57
ATL3-203ENST00000538786 BLCAPP62952 87 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 IGHV3-35A0A0C4DH35 117 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
ATL3-203ENST00000538786 RAB9AP51151 201 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 RELQ04864 619 aaPredicted RBP11.48□□□□□ -0.57
ATL3-203ENST00000538786 PRSS57Q6UWY2 283 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 SERTAD4Q9NUC0 356 aa11.48□□□□□ -0.57
ATL3-203ENST00000538786 TRBV6-1A0A0K0K1D8 114 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 FSHBP01225 129 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 PSG9Q00887 426 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 IGLV2-11P01706 119 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
ATL3-203ENST00000538786 Q86TA4 180 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 Q96MF0 132 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
ATL3-203ENST00000538786 TRAPPC1Q9Y5R8 145 aa11.47□□□□□ -0.57
ATL3-203ENST00000538786 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 K7EQM0 130 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 GATCO43716 136 aaKnown RBP11.46□□□□□ -0.58
ATL3-203ENST00000538786 S100A8P05109 93 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 IER3P46695 156 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 TPPP2P59282 170 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.58
ATL3-203ENST00000538786 PRR27Q6MZM9 219 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.58
ATL3-203ENST00000538786 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms