RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 K7EM74 188 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 OVOL3O00110 214 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 MOSP00540 346 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 LTAP01374 205 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 SLC25A5P05141 298 aaKnown RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 IGHV1-8P0DP01 117 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 GP9P14770 177 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 RPL27AP46776 148 aaKnown RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 GNG5P63218 68 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 FAM120AOSQ5T036 256 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 EBLN2Q6P2I7 272 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 LINC00322Q6ZN03 302 aaPredicted RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 LINC00305Q7Z4B0 112 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 C8orf46Q8TAG6 207 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 BORCS7Q96B45 105 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 FMC1Q96HJ9 113 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 RITA1Q96K30 269 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 RNF5Q99942 180 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 RPP21Q9H633 154 aaKnown RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 ZNF835Q9Y2P0 537 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 SPTBN5Q9NRC6 3674 aaKnown RBP4.55□□□□□ -1.68
VPS33A-203ENST00000536212 CACNA1GO43497 2377 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 DSCAMO60469 2012 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 IGHV2-26A0A0B4J1V2 119 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 A6NNC1 897 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 A8MZ25 164 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 SHISA9B4DS77 424 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 CRXO43186 299 aaPredicted RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 TCF21O43680 179 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 HSBP1O75506 76 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 IGLV1-47P01700 117 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 RBP4P02753 201 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 TCRAP04437 139 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 HNRNPA3P51991 378 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 FOXA3P55318 350 aaPredicted RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 UBE2G1P62253 170 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 HBBP68871 147 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 BSPH1Q075Z2 132 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 RUSC1-AS1Q66K80 236 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 OR1B1Q8NGR6 318 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 H1FXQ92522 213 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 RNASE6Q93091 150 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 CHCHD1Q96BP2 118 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 TMEM133Q9H2Q1 129 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 Q9H3A6 140 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 OTORQ9NRC9 128 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 PEMTQ9UBM1 199 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 SIGLEC9Q9Y336 463 aa4.54□□□□□ -1.68
VPS33A-203ENST00000536212 F11RQ9Y624 299 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 RANBP2P49792 3224 aaKnown RBP4.54□□□□□ -1.68
VPS33A-203ENST00000536212 DSCAML1Q8TD84 2053 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 AHCTF1Q8WYP5 2266 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 RAI1Q7Z5J4 1906 aaPredicted RBP4.53□□□□□ -1.68
VPS33A-203ENST00000536212 E7EQL1 145 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 LY6LH3BQJ8 138 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 I3L2K1 104 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 M0R2Z0 102 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 NDUFB8O95169 186 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 PLAUP00749 431 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 IGLV2-11P01706 119 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 IGHV3-48P01763 117 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 APOHP02749 345 aaPredicted RBP4.53□□□□□ -1.68
VPS33A-203ENST00000536212 OR5AL1P0C617 328 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 IGLC1P0CG04 106 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 ORM2P19652 201 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 NTF3P20783 257 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 TSPOP30536 169 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 RBPJQ06330 500 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 UBE2V1Q13404 147 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 LCN12Q6JVE5 192 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 Q6ZN92 141 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 RBPMS2Q6ZRY4 209 aaKnown RBP4.53□□□□□ -1.68
VPS33A-203ENST00000536212 Q86TA4 180 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 STPG4Q8N801 248 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 RNASE8Q8TDE3 154 aaKnown RBP4.53□□□□□ -1.68
VPS33A-203ENST00000536212 GTSF1Q8WW33 167 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 CCL17Q92583 94 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 NDFIP1Q9BT67 221 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 VCX2Q9H322 139 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 CACNA1DQ01668 2161 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 TANC2Q9HCD6 1990 aa4.53□□□□□ -1.68
VPS33A-203ENST00000536212 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 IGHV1-3A0A0C4DH29 117 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 H3BRN7 92 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 BUB1B-PAK6H3BSN5 160 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 ENSAO43768 121 aaKnown RBP4.52□□□□□ -1.69
VPS33A-203ENST00000536212 P01737 135 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 IGLL1P15814 213 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 GCSHP23434 173 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 CNTFRP26992 372 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 GPR6P46095 362 aaPredicted RBP4.52□□□□□ -1.69
VPS33A-203ENST00000536212 ASPHD1Q5U4P2 390 aa4.52□□□□□ -1.69
VPS33A-203ENST00000536212 PRR27Q6MZM9 219 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms