RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NXT2Q9NPJ8 142 aaKnown RBP14.24□□□□□ -0.13
PHRF1-205ENST00000533464 F2Z2F3 143 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 FNDC10F2Z333 226 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 IGLV1-44P01699 117 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 DSCR9P59020 149 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 LY96Q9Y6Y9 160 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 OVOL1O14753 267 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 Q8TCH9 128 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 TMEM14BQ9NUH8 114 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 DUSP14O95147 198 aaKnown RBP14.24□□□□□ -0.13
PHRF1-205ENST00000533464 TMEM256Q8N2U0 113 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 BEX4Q9NWD9 120 aaPredicted RBP14.24□□□□□ -0.13
PHRF1-205ENST00000533464 FAM215AQ9Y5M1 114 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 ACACBO00763 2458 aa14.24□□□□□ -0.13
PHRF1-205ENST00000533464 LINC00479Q96M42 142 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 NDPQ00604 133 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 PSMG4Q5JS54 123 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 KIAA1671Q9BY89 1806 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 Q8TAT8 98 aa14.23□□□□□ -0.13
PHRF1-205ENST00000533464 SAA4P35542 130 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 EMP1P54849 157 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 C3orf36Q3SXR2 165 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 TRGV2A0A075B6R0 118 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 C17orf58Q2M2W7 97 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 PTPRQQ9UMZ3 2332 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 SRSF1Q07955 248 aaKnown RBP eCLIP14.22□□□□□ -0.137e-7■■■□□ 15
PHRF1-205ENST00000533464 IGFL4Q6B9Z1 124 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
PHRF1-205ENST00000533464 JKAMPQ9P055 326 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 CACNG7P62955 275 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 NUP35Q8NFH5 326 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 MRAP2Q96G30 205 aa14.22□□□□□ -0.13
PHRF1-205ENST00000533464 LYZL1Q6UWQ5 148 aa14.21□□□□□ -0.13
PHRF1-205ENST00000533464 ACTL10Q5JWF8 245 aa14.21□□□□□ -0.14
PHRF1-205ENST00000533464 STHQ8IWL8 128 aa14.21□□□□□ -0.14
PHRF1-205ENST00000533464 TMEM101Q96IK0 257 aa14.21□□□□□ -0.14
PHRF1-205ENST00000533464 DKK1O94907 266 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 NCR2O95944 276 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 PIP4P1Q86T03 277 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 RNF166Q96A37 237 aaPredicted RBP14.2□□□□□ -0.14
PHRF1-205ENST00000533464 MRPL16Q9NX20 251 aaKnown RBP14.2□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF329Q86UD4 541 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 BEND2Q8NDZ0 799 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 RNF138Q8WVD3 245 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 COPS9Q8WXC6 57 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 NCOR1P1Q9H4R4 102 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 ARFGEF3Q5TH69 2177 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 CFHR2P36980 270 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 TMEM190Q8WZ59 177 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 C2orf88Q9BSF0 95 aa14.2□□□□□ -0.14
PHRF1-205ENST00000533464 IGLV3-9A0A075B6K5 115 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 TRBV7-1A0A0A6YYK4 115 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 C15orf65H3BRN8 121 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 CNTFRP26992 372 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 NDUFA4L2Q9NRX3 87 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 TOMM40O96008 361 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 LOXP28300 417 aaPredicted RBP14.19□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF134P52741 427 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF138P52744 262 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 LCN12Q6JVE5 192 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 D6R8Y8 96 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF562Q6V9R5 426 aa14.19□□□□□ -0.14
PHRF1-205ENST00000533464 MMP23AO75900 390 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 PSG3Q16557 428 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 RASL11AQ6T310 242 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF688P0C7X2 276 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 CYSLTR1Q9Y271 337 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 NUP210Q8TEM1 1887 aaPredicted RBP14.18□□□□□ -0.14
PHRF1-205ENST00000533464 EP400Q96L91 3159 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 LYPD1Q8N2G4 141 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 VCX2Q9H322 139 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 WT1P19544 449 aaPredicted RBP14.18□□□□□ -0.14
PHRF1-205ENST00000533464 ORMDL2Q53FV1 153 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 PYY3Q5JQD4 70 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 CYB5R2Q6BCY4 276 aa14.18□□□□□ -0.14
PHRF1-205ENST00000533464 APOMO95445 188 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF833PQ6ZTB9 187 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 C9orf139Q6ZV77 190 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 SRSF8Q9BRL6 282 aaKnown RBP14.17□□□□□ -0.14
PHRF1-205ENST00000533464 SH2D1AO60880 128 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 DPM2O94777 84 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 NOTCH2Q04721 2471 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 IFI27P40305 119 aaPredicted RBP14.17□□□□□ -0.14
PHRF1-205ENST00000533464 JMJD8Q96S16 334 aa14.17□□□□□ -0.14
PHRF1-205ENST00000533464 SRRM4A7MD48 611 aaKnown RBP14.16□□□□□ -0.14
PHRF1-205ENST00000533464 ZNF726P1Q15940 193 aa14.16□□□□□ -0.14
PHRF1-205ENST00000533464 SHANK2-AS3Q9BTD1 123 aa14.16□□□□□ -0.14
PHRF1-205ENST00000533464 MED13Q9UHV7 2174 aa14.16□□□□□ -0.14
PHRF1-205ENST00000533464 TEX36Q5VZQ5 186 aa14.16□□□□□ -0.14
PHRF1-205ENST00000533464 Q8NFD4 153 aa14.16□□□□□ -0.14
PHRF1-205ENST00000533464 TOMM7Q9P0U1 55 aa14.15□□□□□ -0.14
PHRF1-205ENST00000533464 H3BRM9 83 aa14.15□□□□□ -0.14
PHRF1-205ENST00000533464 IL15RAQ13261 267 aa14.15□□□□□ -0.14
PHRF1-205ENST00000533464 OR13C6PQ8NH95 151 aa14.15□□□□□ -0.14
PHRF1-205ENST00000533464 USMG5Q96IX5 58 aa14.15□□□□□ -0.14
PHRF1-205ENST00000533464 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms