RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 IGKV2-40A0A087WW87 121 aaPredicted RBP12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 IGKV2D-40P01614 121 aaPredicted RBP12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 CHCHD1Q96BP2 118 aaKnown RBP12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 WDR87Q6ZQQ6 2873 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 MUC22E2RYF6 1773 aaPredicted RBP12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 TRAV9-2A0A087WT02 112 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 NPFFO15130 113 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 RNASE4P34096 147 aaKnown RBP12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 ERASQ7Z444 233 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 FOXC2Q99958 501 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 BPESC1Q9GZL8 116 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 DKK4Q9UBT3 224 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 NBL1P41271 181 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
PCDHA3-202ENST00000532566 TRAV8-6A0A0B4J262 113 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 TOMM40O96008 361 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 HBDP02042 147 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 ZNF562Q6V9R5 426 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 LAMTOR2Q9Y2Q5 125 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 PRR14LQ5THK1 2151 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 F2Z2F3 143 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 GLMPQ8WWB7 406 aa12.36□□□□□ -0.43
PCDHA3-202ENST00000532566 WT1-ASQ06250 92 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 SIGLEC15Q6ZMC9 328 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 NXT2Q9NPJ8 142 aaKnown RBP12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 H7C1H1 209 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 FBLN7Q53RD9 439 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 SNAI2O43623 268 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 CNTFRP26992 372 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 BRD3OSQ6XYD6 125 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 OR4X2Q8NGF9 303 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 SMAD7O15105 426 aaKnown RBP12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
PCDHA3-202ENST00000532566 CIDEAO60543 219 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 SAA4P35542 130 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 SHANK2-AS3Q9BTD1 123 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 KAAG1Q9UBP8 84 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 DSCR9P59020 149 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 H3BUX3 64 aa12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 LGALS3P17931 250 aaKnown RBP12.34□□□□□ -0.43
PCDHA3-202ENST00000532566 LEPP41159 167 aa12.33□□□□□ -0.43
PCDHA3-202ENST00000532566 PSG3Q16557 428 aa12.33□□□□□ -0.43
PCDHA3-202ENST00000532566 PRSS33Q8NF86 280 aa12.33□□□□□ -0.43
PCDHA3-202ENST00000532566 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 K7EM74 188 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 OVOL1O14753 267 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 PTPRQQ9UMZ3 2332 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 B4DSR2 109 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.44
PCDHA3-202ENST00000532566 Q86TA4 180 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 CD7P09564 240 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 PEF1Q9UBV8 284 aaKnown RBP12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 PRSS2P07478 247 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 CACNG7P62955 275 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 PDE6HQ13956 83 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 LYZL1Q6UWQ5 148 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 Q8TAT8 98 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 SLX1AQ9BQ83 275 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 MRPL27Q9P0M9 148 aaKnown RBP12.32□□□□□ -0.44
PCDHA3-202ENST00000532566 ARFGEF3Q5TH69 2177 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 TYMSP04818 313 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 C19orf54Q5BKX5 351 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 ZNF138P52744 262 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 TTC9CQ8N5M4 171 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 LHBP01229 141 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
PCDHA3-202ENST00000532566 UBE2E1P51965 193 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR20EP86478 221 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR20CP86479 221 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR20DP86480 221 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR20BP86481 221 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PRR20AP86496 221 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 LCN12Q6JVE5 192 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms