RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 DOCK4Q8N1I0 1966 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 FANCMQ8IYD8 2048 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SHROOM3Q8TF72 1996 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 IGKV1D-43A0A0B4J1Z2 117 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 OR51F1A6NGY5 319 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 HYPMO75409 117 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 UBL3O95164 117 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 CYB5AP00167 134 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 HRASP01112 189 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 KRASP01116 189 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF823P16415 610 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 KLRD1Q13241 179 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF345Q14585 488 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 RRN3P1Q2M238 152 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF678Q5SXM1 525 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 LCA10Q71F78 164 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 GPHB5Q86YW7 130 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 OR5C1Q8NGR4 320 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 H1FXQ92522 213 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 IMMP2LQ96T52 175 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 TCEAL2Q9H3H9 227 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 LSM2Q9Y333 95 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 DNAJC15Q9Y5T4 150 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 IER3IP1Q9Y5U9 82 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 PLXNA1Q9UIW2 1896 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 FXYD6-FXYD2A0A087WZ82 144 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 MEIS3P1A6NDR6 274 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 GNGT2O14610 69 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 YPEL1O60688 119 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 IGHV3-23P01764 117 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 POLR2JP52435 117 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 NCBP2-AS2Q69YL0 99 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 MRPL54Q6P161 138 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 RPP25LQ8N5L8 163 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 C3orf22Q8N5N4 141 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 SLC25A29Q8N8R3 303 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 NPBQ8NG41 125 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 TMEM190Q8WZ59 177 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 YPEL2Q96QA6 119 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 FXYD6Q9H0Q3 95 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 SCN2AQ99250 2005 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 ANKRD12Q6UB98 2062 aa3.81□□□□□ -1.8
ECHDC1-222ENST00000531967 TRGV10A0A0A0MS01 117 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 RER1O15258 196 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 CXCL1P09341 107 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF80P51504 273 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 MSMO1Q15800 293 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 KCNRGQ8N5I3 272 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 LCTP09848 1927 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 SFT2D2O95562 160 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 IGLV2-23P01705 113 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 SPATA45Q537H7 98 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 GUSBP11Q6P575 273 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 MSRB3Q8IXL7 192 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 CACNG5Q9UF02 275 aa3.8□□□□□ -1.8
ECHDC1-222ENST00000531967 M0R378 163 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 SRP19P09132 144 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 CRISP2P16562 243 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 MPV17L2Q567V2 206 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 Q6ZUT4 128 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 FGF23Q9GZV9 251 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 RERGLQ9H628 205 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 RPRMQ9NS64 109 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 TMEM106BQ9NUM4 274 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 TNS1Q9HBL0 1735 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 KIAA1671Q9BY89 1806 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 LOC285095A0A1B0GVY8 99 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 CGAP01215 116 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 IGKV1-39P01597 117 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 IGKV1D-39P04432 117 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 IFITM1P13164 125 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 GNB1P62873 340 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 ADIRFQ15847 76 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 Q6AWC8 147 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 RAI1Q7Z5J4 1906 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 OR5D14Q8NGL3 314 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 DEC1Q9P2X7 70 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 LINC00312Q9Y6C7 94 aa3.79□□□□□ -1.8
ECHDC1-222ENST00000531967 COL4A5P29400 1685 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 IRGMA1A4Y4 181 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 SNRPGP15A8MWD9 76 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 IGKV1-5P01602 117 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF93P35789 620 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 YPEL3P61236 119 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 LINC00305Q7Z4B0 112 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 NR2C2APQ86WQ0 139 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 PYGO2Q9BRQ0 406 aa3.78□□□□□ -1.8
ECHDC1-222ENST00000531967 MRPL32Q9BYC8 188 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms