RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 HIST1H2BMQ99879 126 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 COLCA2A8K830 154 aa6.96□□□□□ -1.3
CTNND1-221ENST00000529873 PPIFP30405 207 aaKnown RBP6.96□□□□□ -1.3
CTNND1-221ENST00000529873 H3BMM0 161 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 PAX4O43316 350 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 C3orf36Q3SXR2 165 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 GAGE2AQ6NT46 116 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 ZNF114Q8NC26 417 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 CD5LO43866 347 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 SH2D1AO60880 128 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 SLC25A16P16260 332 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 PSG3Q16557 428 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 UNQ6494/PRO21346Q6UXR6 183 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 ADAMTSL5Q6ZMM2 481 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-221ENST00000529873 GFI1BQ5VTD9 330 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 BCL6BQ8N143 479 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-221ENST00000529873 RASL10AQ92737 203 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 TRAV3A0A0B4J244 114 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 A4D1N5 150 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 PSPNO60542 156 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 CD33P20138 364 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
CTNND1-221ENST00000529873 QRFPP83859 136 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 PCM1Q15154 2024 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 Q6ZS49 121 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 C9orf139Q6ZV77 190 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 ANKRD29Q8N6D5 301 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
CTNND1-221ENST00000529873 GBF1Q92538 1859 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 SOCS3O14543 225 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 BMPERQ8N8U9 685 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 GZMBP10144 247 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 SUPT4H1P63272 117 aaKnown RBP6.94□□□□□ -1.3
CTNND1-221ENST00000529873 C5orf64Q2M2E5 130 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 NMSQ5H8A3 153 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 LEPROTO15243 131 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 IGKV1-5P01602 117 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 AMBPP02760 352 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 TCTEX1D4Q5JR98 221 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 ACTL10Q5JWF8 245 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 LY96Q9Y6Y9 160 aa6.94□□□□□ -1.3
CTNND1-221ENST00000529873 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 LILRA1O75019 489 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 DUX4L9Q6RFH8 374 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-221ENST00000529873 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 KLF2Q9Y5W3 355 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-221ENST00000529873 TCRAP04437 139 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 COL8A2P25067 703 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 ZNF138P52744 262 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 KLF17Q5JT82 389 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-221ENST00000529873 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 TMEM14EPQ6UXP3 125 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 C22orf46C9J442 243 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 INS-IGF2F8WCM5 200 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 INSP01308 110 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 LYPD1Q8N2G4 141 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 UBE2WQ96B02 151 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 NINQ8N4C6 2090 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 FNDC10F2Z333 226 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 H3BUX3 64 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 FOXL1Q12952 345 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 C11orf44Q8N8P7 122 aa6.93□□□□□ -1.3
CTNND1-221ENST00000529873 D6R8Y8 96 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 K7EP13 123 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 NCR2O95944 276 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 UTF1Q5T230 341 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 RNF166Q96A37 237 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-221ENST00000529873 TRAV8-3A0A0A6YYJ7 113 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 LINC00473A8K010 186 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 CEACAM8P31997 349 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-221ENST00000529873 LYPD2Q6UXB3 125 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 UBL5Q9BZL1 73 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 ARID1AO14497 2285 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 COL4A6Q14031 1691 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 C5orf63A6NC05 138 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 LYL1P12980 280 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 Q6ZS92 163 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 CRIM1Q9NZV1 1036 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 SIGLEC9Q9Y336 463 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 KNTC1P50748 2209 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 BRWD1Q9NSI6 2320 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 TRBV20-1A0A075B6N2 111 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 HGFACQ04756 655 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms