RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MLST8Q9BVC4 326 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 DCHS2Q6V1P9 2916 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 LTAP01374 205 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 GNG5P63218 68 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 BRD3OSQ6XYD6 125 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 LINC00479Q96M42 142 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 AAMDCQ9H7C9 122 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF580Q9UK33 172 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.56
ECHDC1-220ENST00000528402 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 USP24Q9UPU5 2620 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 IGHV3OR16-10A0A075B7F0 116 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 IGHG2P01859 326 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 CLEC3BP05452 202 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 CSN1S1P47710 185 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 CT83Q5H943 113 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 C1orf194Q5T5A4 169 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 USMG5Q96IX5 58 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 SERTAD4Q9NUC0 356 aa11.52□□□□□ -0.57
ECHDC1-220ENST00000528402 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 A0A096LNT2 108 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 TRAV34A0A0B4J273 112 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 IZUMO1RA6ND01 250 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 AMY1AP04745 511 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 ADMP35318 185 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 SIGLEC15Q6ZMC9 328 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 S4R3C0 116 aa11.51□□□□□ -0.57
ECHDC1-220ENST00000528402 CFAP46Q8IYW2 2715 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 G3V318 75 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 H3BUX3 64 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 C12orf57Q99622 126 aa11.5□□□□□ -0.57
ECHDC1-220ENST00000528402 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 A8MWL6 223 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 IGHV3-23P01764 117 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 GPR183P32249 361 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 DEFB113Q30KQ7 82 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 PRSS57Q6UWY2 283 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 TSKUQ8WUA8 353 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
ECHDC1-220ENST00000528402 A0A087X0K7 114 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 A1L4Q6 167 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 OR5R1Q8NH85 324 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 NRGNQ92686 78 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 ZFAND3Q9H8U3 227 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 RPH3ALQ9UNE2 315 aa11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-220ENST00000528402 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 DIRC3C9JPN6 131 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 PSG3Q16557 428 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 C9orf152Q5JTZ5 239 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 CLEC19AQ6UXS0 136 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 Q86TA4 180 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 CCDC140Q96MF4 163 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 USP9XQ93008 2570 aaPredicted RBP11.47□□□□□ -0.57
ECHDC1-220ENST00000528402 A0A0G2JLM5 398 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 H3BTX0 84 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 TGFAP01135 160 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 IGLV2-11P01706 119 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 P01737 135 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 TRGV3P03979 118 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 PPIFP30405 207 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 DNLZQ5SXM8 178 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 NHLRC2Q8NBF2 726 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 MS4A10Q96PG2 267 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 METTL26Q96S19 204 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 MRPL18Q9H0U6 180 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
ECHDC1-220ENST00000528402 BUB3O43684 328 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms