RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CROCCP2Q86T23 111 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 PPTC7Q8NI37 304 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 LZICQ8WZA0 190 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 GINS4Q9BRT9 223 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 NHP2Q9NX24 153 aaKnown RBP1.5□□□□□ -2.17
PTPN12-213ENST00000519553 NAT8BQ9UHF3 227 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 PAIP2BQ9ULR5 123 aaKnown RBP1.5□□□□□ -2.17
PTPN12-213ENST00000519553 RNF11Q9Y3C5 154 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 RIMBP3CA6NJZ7 1639 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 RIMBP3BA6NNM3 1639 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 RIMBP3Q9UFD9 1639 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 NUP210LQ5VU65 1888 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 NUP210Q8TEM1 1887 aaPredicted RBP1.5□□□□□ -2.17
PTPN12-213ENST00000519553 RTTNQ86VV8 2226 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 IGHV1-58A0A0C4DH39 117 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 GABARAPH6UMI1 98 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 NDUFB3O43676 98 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 NDUFA2O43678 99 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 CST7O76096 145 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 DEFA4P12838 97 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 HLA-EP13747 358 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 AQP4P55087 323 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 CKS1BP61024 79 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 KHDC3LQ587J8 217 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 DPPA3Q6W0C5 159 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 PDZD9Q8IXQ8 264 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 OR2T10Q8NGZ9 312 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 C10orf105Q8TEF2 133 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 Q96M85 177 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 PRADC1Q9BSG0 188 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 ADAT1Q9BUB4 502 aaKnown RBP1.49□□□□□ -2.17
PTPN12-213ENST00000519553 FAM107BQ9H098 131 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 TCEAL2Q9H3H9 227 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-213ENST00000519553 TPT1P8Q9HAU6 139 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 BAIAP2Q9UQB8 552 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 SBF1O95248 1867 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 NISCHQ9Y2I1 1504 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 CEP164Q9UPV0 1460 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 ZFHX2Q9C0A1 2572 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-213ENST00000519553 OVOS2A0A0G2JMS6 1433 aa1.49□□□□□ -2.17
PTPN12-213ENST00000519553 PIK3C2AO00443 1686 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 SMARCA4P51532 1647 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 VIRMAQ69YN4 1812 aaKnown RBP1.48□□□□□ -2.17
PTPN12-213ENST00000519553 SDCBPO00560 298 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-213ENST00000519553 TNFSF15O95150 251 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 SHBGP04278 402 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 CTSDP07339 412 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-213ENST00000519553 CXCL1P09341 107 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 RPL35P42766 123 aaKnown RBP1.48□□□□□ -2.17
PTPN12-213ENST00000519553 DYNLT1P63172 113 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 HBBP68871 147 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 RHOGP84095 191 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 MYL5Q02045 173 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 CCDC58Q4VC31 144 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 Q5XG85 94 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 LCN15Q6UWW0 184 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 PATE2Q6UY27 113 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 Q6ZQT0 140 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 ZNF826PQ6ZT77 177 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 IFT20Q8IY31 132 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 OR8I2Q8N0Y5 310 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 OR4E2Q8NGC2 313 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 OR8J3Q8NGG0 315 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 AQP3Q92482 292 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 NPCDR1Q9BY65 106 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 HSPB8Q9UJY1 196 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 TRAPPC2LQ9UL33 140 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 HS3ST2Q9Y278 367 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 CUL9Q8IWT3 2517 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
PTPN12-213ENST00000519553 RTL9Q8NET4 1388 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 MYH10P35580 1976 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 ODAMA1E959 279 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 A8MWV9 139 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 C9JAW5 83 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 HIST1H2BKO60814 126 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 HIST1H2BJP06899 126 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 MPC1LP0DKB6 136 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 CRYGAP11844 174 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 SDC2P34741 201 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 TMBIM6P55061 237 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 ARPP19P56211 112 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 NDUFA6P56556 154 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 SPCS2Q15005 226 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 MSMO1Q15800 293 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 NNATQ16517 81 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 EIF5AL1Q6IS14 154 aaKnown RBP1.47□□□□□ -2.17
PTPN12-213ENST00000519553 SOSTDC1Q6X4U4 206 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 AAED1Q7RTV5 226 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 SLC30A7Q8NEW0 376 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 LXNQ9BS40 222 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 HIGD1AQ9Y241 93 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 A2MP01023 1474 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 NUP98P52948 1817 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 PTPRBP23467 1997 aa1.47□□□□□ -2.17
PTPN12-213ENST00000519553 ARHGEF11O15085 1522 aa1.46□□□□□ -2.18
PTPN12-213ENST00000519553 CCDC88AQ3V6T2 1871 aa1.46□□□□□ -2.18
PTPN12-213ENST00000519553 ANKRD31Q8N7Z5 1873 aa1.46□□□□□ -2.18
PTPN12-213ENST00000519553 LOC107984640A0A0U1RRK4 108 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms