RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 RPL35P42766 123 aaKnown RBP1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 RPS28P62857 69 aaKnown RBP1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 OR8B8Q15620 311 aa1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 PCOTHQ58A44 107 aa1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 COA5Q86WW8 74 aa1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 Q96M85 177 aa1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 CACYBPQ9HB71 228 aaKnown RBP1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
RNU6-488P-201ENST00000515918 COL4A5P29400 1685 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 ARHGEF11O15085 1522 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 COL5A1P20908 1838 aaPredicted RBP1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 IGKV2D-26A0A0A0MRZ7 120 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 TRAV12-1A0A0B4J245 112 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 ARL5CA6NH57 179 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 ZNF705BP0CI00 300 aaPredicted RBP1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 FABP2P12104 132 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 PDE6HQ13956 83 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR4K15Q8NH41 348 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 TAS2R7Q9NYW3 318 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 RGS12O14924 1447 aa1.83□□□□□ -2.12
RNU6-488P-201ENST00000515918 NUP98P52948 1817 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 NISCHQ9Y2I1 1504 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 TRAV36DV7A0A075B6V5 113 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 A0A1B0GX51 115 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 DEGS1O15121 323 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 PROSCO94903 275 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 DHFRP00374 187 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR10J4P0C629 311 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 SDC2P34741 201 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 KLRD1Q13241 179 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 Q8N814 137 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 TMEM229BQ8NBD8 167 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR5D16Q8NGK9 328 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 POP5Q969H6 163 aaKnown RBP1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 CHCHD1Q96BP2 118 aaKnown RBP1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 ZNF625Q96I27 306 aaPredicted RBP1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 RTL9Q8NET4 1388 aa1.82□□□□□ -2.12
RNU6-488P-201ENST00000515918 N4BP2Q86UW6 1770 aaPredicted RBP1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 LOC107984640A0A0U1RRK4 108 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 IFNA4P05014 189 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 PSG9Q00887 426 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 C1orf134Q5TEV5 83 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 Q5XG85 94 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR2T35Q8NGX2 323 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 TCEAL2Q9H3H9 227 aaPredicted RBP1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 GSKIPQ9P0R6 139 aa1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 ZCCHC6Q5VYS8 1495 aaKnown RBP1.81□□□□□ -2.12
RNU6-488P-201ENST00000515918 PIK3C2AO00443 1686 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 TRBV7-6A0A0J9YX20 115 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 RNASE3P12724 160 aaKnown RBP1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 VMA21Q3ZAQ7 101 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 LINC00305Q7Z4B0 112 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 TEX29Q8N6K0 151 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 SFT2D1Q8WV19 159 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 MAFIPQ8WZ33 124 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 NIT2Q9NQR4 276 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 SPANXA1Q9NS26 97 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 RASL12Q9NYN1 266 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 LY96Q9Y6Y9 160 aa1.8□□□□□ -2.12
RNU6-488P-201ENST00000515918 SCN8AQ9UQD0 1980 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 TRBV6-5A0A0K0K1A5 114 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 MT-ND6P03923 174 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 SDC4P31431 198 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 C10orf55Q5SWW7 151 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 FAM216BQ8N7L0 139 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 DIRC1Q969H9 104 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 LXNQ9BS40 222 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 CBLN4Q9NTU7 201 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 OVOS2A0A0G2JMS6 1433 aa1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 TCOF1Q13428 1488 aaKnown RBP1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 COL5A3P25940 1745 aaPredicted RBP1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 MDC1Q14676 2089 aaKnown RBP1.79□□□□□ -2.12
RNU6-488P-201ENST00000515918 FN1P02751 2386 aaKnown RBP1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 EML6Q6ZMW3 1958 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 TRAV14DV4A0A0A6YYC5 116 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 A0A1B0GW64 132 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 GPX1P07203 203 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 BRS3P32247 399 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 S100A12P80511 92 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 CLECL1Q8IZS7 167 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 Q8N2B8 174 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR5D14Q8NGL3 314 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 OR5AC2Q9NZP5 309 aa1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 SOX21Q9Y651 276 aaPredicted RBP1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 CHCHD2Q9Y6H1 151 aaPredicted RBP1.78□□□□□ -2.12
RNU6-488P-201ENST00000515918 TAF1LQ8IZX4 1826 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 A2MP01023 1474 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 TRAV13-1A0A0B4J241 112 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 TRBV27A0A0K0K1C4 114 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 C17orf112F2Z3M2 114 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 M0QZK8 103 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 M0R233 179 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 TNFSF15O95150 251 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 RAB5CP51148 216 aa1.77□□□□□ -2.13
RNU6-488P-201ENST00000515918 DSCR4P56555 118 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms