RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
DDX41-216ENST00000513562 ZNF98A6NK75 572 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 GABARAPH6UMI1 98 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 H7BYZ3 331 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 GABARAPO95166 117 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 GPX4P36969 197 aaPredicted RBP7.45□□□□□ -1.22
DDX41-216ENST00000513562 MEF2DQ14814 521 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 RNASE10Q5GAN6 216 aaKnown RBP7.45□□□□□ -1.22
DDX41-216ENST00000513562 SELENOHQ8IZQ5 122 aaKnown RBP7.45□□□□□ -1.22
DDX41-216ENST00000513562 LGI3Q8N145 548 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 OR1B1Q8NGR6 318 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 SLC35E1Q96K37 410 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 TRGV9Q99603 122 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
DDX41-216ENST00000513562 IGKV1OR2-108A0A075B7D4 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GAGE12BA1L429 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GAGE7O76087 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 NXPH4O95158 308 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 TGFBR1P36897 503 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 HIST1H1AQ02539 215 aaPredicted RBP7.44□□□□□ -1.22
DDX41-216ENST00000513562 ZNF738Q8NE65 137 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 GPR82Q96P67 336 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 RAB26Q9ULW5 256 aa7.44□□□□□ -1.22
DDX41-216ENST00000513562 TEX13DA0A0J9YY54 714 aaPredicted RBP7.43□□□□□ -1.22
DDX41-216ENST00000513562 SMIM31A0A1B0GVY4 71 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
DDX41-216ENST00000513562 APOA1P02647 267 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 RLN2P04090 185 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 CD3DP04234 171 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 SULT1A3P0DMM9 295 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 SULT1A4P0DMN0 295 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 TBPP20226 339 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 RPS19P39019 145 aaKnown RBP7.43□□□□□ -1.22
DDX41-216ENST00000513562 CDKN1BP46527 198 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 ATP5IP56385 69 aaPredicted RBP7.43□□□□□ -1.22
DDX41-216ENST00000513562 RHOBP62745 196 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 TMEM268Q5VZI3 342 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 THAP8Q8NA92 274 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 OR8A1Q8NGG7 326 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 OR4D10Q8NGI6 311 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 TERB2Q8NHR7 220 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 NAA60Q9H7X0 242 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 HSPB7Q9UBY9 170 aa7.43□□□□□ -1.22
DDX41-216ENST00000513562 TNFAIP8O95379 198 aa7.42□□□□□ -1.22
DDX41-216ENST00000513562 TMED4Q7Z7H5 227 aa7.42□□□□□ -1.22
DDX41-216ENST00000513562 MARCH1Q8TCQ1 289 aa7.42□□□□□ -1.22
DDX41-216ENST00000513562 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
DDX41-216ENST00000513562 TMEM56-RWDD3S4R434 201 aa7.42□□□□□ -1.22
DDX41-216ENST00000513562 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 SNURFLB1AK76 121 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 CXCL3P19876 107 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 FGL1Q08830 312 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 GGNBP1Q5YKI7 109 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 CCDC28AQ8IWP9 274 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 DEFB104AQ8WTQ1 72 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 RTBDNQ9BSG5 229 aaPredicted RBP7.41□□□□□ -1.22
DDX41-216ENST00000513562 RBKSQ9H477 322 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 COMMD3Q9UBI1 195 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
DDX41-216ENST00000513562 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 PLA2G1BP04054 148 aaKnown RBP7.4□□□□□ -1.22
DDX41-216ENST00000513562 ORM2P19652 201 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 CCR6P51684 374 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.22
DDX41-216ENST00000513562 SCGB2B2Q4G0G5 96 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 GPR107Q5VW38 600 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 Q6ZTI0 123 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 IL22RA2Q969J5 263 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 TMEM147Q9BVK8 224 aa7.4□□□□□ -1.22
DDX41-216ENST00000513562 C14orf166Q9Y224 244 aaKnown RBP7.4□□□□□ -1.22
DDX41-216ENST00000513562 TRAV9-2A0A087WT02 112 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 A0A087X0K7 114 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 CRYM-AS1A6NIL9 109 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 H3BRN7 92 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 GATA2P23769 480 aaPredicted RBP7.39□□□□□ -1.23
DDX41-216ENST00000513562 S100A7P31151 101 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 SMCO1Q147U7 214 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 NEDD8Q15843 81 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 PSG3Q16557 428 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 TMEM182Q6ZP80 229 aaPredicted RBP7.39□□□□□ -1.23
DDX41-216ENST00000513562 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 OR52I2Q8NH67 350 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
DDX41-216ENST00000513562 LINC00467Q9BRT7 94 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 FAM30AQ9NZY2 134 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 MTFP1Q9UDX5 166 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
DDX41-216ENST00000513562 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 K7EP13 123 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 HPGDSO60760 199 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms