RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 IGFL4Q6B9Z1 124 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 PRSS33Q8NF86 280 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 E7EQL1 145 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 CT83Q5H943 113 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 Q6ZS92 163 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 NUPR2A6NF83 97 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 C1QTNF5Q9BXJ0 243 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 TPRP12270 2363 aaKnown RBP7.25□□□□□ -1.25
VCAN-208ENST00000512590 MYH3P11055 1940 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 PROP1O75360 226 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 NEGR1Q7Z3B1 354 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 BRWD1Q9NSI6 2320 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 TRAV12-2A0A075B6T6 113 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 SERF1AO75920 110 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 LAMB4A4D0S4 1761 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 PQLC2LA1A4F0 135 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 TRACP01848 142 aa7.25□□□□□ -1.25
VCAN-208ENST00000512590 ZFP36L1Q07352 338 aaKnown RBP7.25□□□□□ -1.25
VCAN-208ENST00000512590 IFITM3Q01628 133 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 RAMP3O60896 148 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 SCRT1Q9BWW7 348 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 PIN1P1O15428 100 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 IGLV1-36A0A0B4J1U3 117 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 HLA-DRB4P13762 266 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 GLRX5Q86SX6 157 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 HLA-DRB4X5D2U9 266 aa7.24□□□□□ -1.25
VCAN-208ENST00000512590 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 SPRY2O43597 315 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 RPP25LQ8N5L8 163 aaKnown RBP7.23□□□□□ -1.25
VCAN-208ENST00000512590 C16orf74Q96GX8 76 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 SH2D1AO60880 128 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 LTAP01374 205 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 SMPXQ9UHP9 88 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 DEFB135Q30KP9 77 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 HEPN1Q6WQI6 88 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 Q8TAT8 98 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 PLPPR1Q8TBJ4 325 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 LINC00479Q96M42 142 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 UBE2D2P62837 147 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 KIF13AQ9H1H9 1805 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 TRAV3A0A0B4J244 114 aa7.23□□□□□ -1.25
VCAN-208ENST00000512590 FER1L6Q2WGJ9 1857 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 MYCNOSP40205 109 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 LIMS2Q7Z4I7 341 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 LY6G6EA0A0G2JKS1 128 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 H3BUT2 72 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 HOXB4P17483 251 aaPredicted RBP7.22□□□□□ -1.25
VCAN-208ENST00000512590 MST1P26927 711 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 TAF1P21675 1872 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 A0A1B0GX51 115 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 IGHV4-59P01825 116 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 EXOC3-AS1Q8N2X6 119 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 PINLYPA6NC86 204 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 NDUFA1O15239 70 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 PCP2Q8IVA1 136 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 LYPD6BQ8NI32 183 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 CHCHD1Q96BP2 118 aaKnown RBP7.22□□□□□ -1.25
VCAN-208ENST00000512590 SPAG17Q6Q759 2223 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 RGPD4Q7Z3J3 1758 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 USP54Q70EL1 1684 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 DEFB136Q30KP8 78 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 LYPD2Q6UXB3 125 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 STPG4Q8N801 248 aa7.22□□□□□ -1.25
VCAN-208ENST00000512590 CENPVL1A0A0U1RR11 272 aa7.21□□□□□ -1.25
VCAN-208ENST00000512590 A0A1B0GTL3 188 aa7.21□□□□□ -1.25
VCAN-208ENST00000512590 DEFB4AO15263 64 aa7.21□□□□□ -1.25
VCAN-208ENST00000512590 GATA6Q92908 595 aa7.21□□□□□ -1.25
VCAN-208ENST00000512590 MYH7P12883 1935 aa7.21□□□□□ -1.25
VCAN-208ENST00000512590 RP1L1Q8IWN7 2480 aaPredicted RBP7.21□□□□□ -1.26
VCAN-208ENST00000512590 C21orf62-AS1Q17RA5 79 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 C10orf55Q5SWW7 151 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 C14orf144Q96I85 54 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 CYTL1Q9NRR1 136 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 DEPPQ9NTK1 212 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 MYH8P13535 1937 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 IGKV1-6A0A0C4DH72 117 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 KIR2DL5BA0A0G2JN68 375 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 KIR2DL5BA0A0G2JPC4 375 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 KIR2DL5AQ8N109 375 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 NPBQ8NG41 125 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 NINQ8N4C6 2090 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 TMEM190Q8WZ59 177 aa7.21□□□□□ -1.26
VCAN-208ENST00000512590 PRYO14603 147 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 LYZL1Q6UWQ5 148 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 NFE4Q86UQ8 179 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 APCDD1LQ8NCL9 501 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 CASP8AP2Q9UKL3 1982 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 IGKV1D-13A0A0B4J2D9 117 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 COX7A2LO14548 114 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 IGKV1-13P0DP09 117 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 LAIR2Q6ISS4 152 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 GGNQ86UU5 652 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
VCAN-208ENST00000512590 U3KQE9 123 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms