RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PRRC2BQ5JSZ5 2229 aaKnown RBP2.06□□□□□ -2.08
MBD4-209ENST00000511009 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
MBD4-209ENST00000511009 MKI67P46013 3256 aaKnown RBP2.06□□□□□ -2.08
MBD4-209ENST00000511009 MAST2Q6P0Q8 1798 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 PLXNB2O15031 1838 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 PHIPQ8WWQ0 1821 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 PTPRFP10586 1907 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 ALPK3Q96L96 1907 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 CACNA1GO43497 2377 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 BUB1B-PAK6H3BSN5 160 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 J3QRK9 145 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 SDCBPO00560 298 aaPredicted RBP2.05□□□□□ -2.08
MBD4-209ENST00000511009 HMGB3O15347 200 aaKnown RBP2.05□□□□□ -2.08
MBD4-209ENST00000511009 NAPSAO96009 420 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 GPX1P07203 203 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 CDC42P60953 191 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 RPL19P84098 196 aaKnown RBP2.05□□□□□ -2.08
MBD4-209ENST00000511009 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 ZNF439Q8NDP4 499 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 OR8B3Q8NGG8 313 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 PPTC7Q8NI37 304 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 CKLFQ9UBR5 152 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 ZNF236Q9UL36 1845 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 MYH1P12882 1939 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 CACNA1AO00555 2505 aa2.05□□□□□ -2.08
MBD4-209ENST00000511009 CENPFP49454 3210 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 MEIKINA0A087WXM9 373 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 A0A0D9SG52 128 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 OVOL1O14753 267 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 OR2J2O76002 312 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 PMP2P02689 132 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 C1QCP02747 245 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 IGKV1-16P04430 117 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 CD52P31358 61 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 SERPINB9P50453 376 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 YPEL3P61236 119 aaPredicted RBP2.04□□□□□ -2.08
MBD4-209ENST00000511009 KHDC3LQ587J8 217 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 LYRM7Q5U5X0 104 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 GOLT1AQ6ZVE7 132 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 TMED4Q7Z7H5 227 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 C12orf45Q8N5I9 185 aaPredicted RBP2.04□□□□□ -2.08
MBD4-209ENST00000511009 PFN4Q8NHR9 129 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 GPR146Q96CH1 333 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
MBD4-209ENST00000511009 PARVBQ9HBI1 364 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 OSTCQ9NRP0 149 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 PLXNA1Q9UIW2 1896 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 BRCA2P51587 3418 aa2.04□□□□□ -2.08
MBD4-209ENST00000511009 SZT2Q5T011 3432 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 PLIN4Q96Q06 1357 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 SIGLEC16A6NMB1 481 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 C1orf196B1AJZ1 125 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 CLDN25C9JDP6 229 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 E5RI56 91 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 ZNF737O75373 536 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 HTR1AP08908 422 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 G6PCP35575 357 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 PSMD8P48556 350 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 HSPE1P61604 102 aaKnown RBP2.03□□□□□ -2.08
MBD4-209ENST00000511009 RHOBP62745 196 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 ALX1Q15699 326 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 ARHGAP11BQ3KRB8 267 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 C7orf65Q6ZTY9 151 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 DHFR2Q86XF0 187 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 SIGLECL1Q8N7X8 197 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 HSPB9Q9BQS6 159 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 LAMA3Q16787 3333 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 KIAA2026Q5HYC2 2103 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 GREB1Q4ZG55 1949 aa2.03□□□□□ -2.08
MBD4-209ENST00000511009 LRRC37A2A6NM11 1700 aa2.03□□□□□ -2.09
MBD4-209ENST00000511009 RIF1Q5UIP0 2472 aaKnown RBP2.02□□□□□ -2.09
MBD4-209ENST00000511009 COL6A3P12111 3177 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 BRWD1Q9NSI6 2320 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 NCKAP5O14513 1909 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 A0A0D9SFI3 127 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 TRAPPC13A5PLN9 417 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 C5orf67F2Z3F1 127 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 ATG12O94817 140 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 TCL1BO95988 128 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 KRR1Q13601 381 aaKnown RBP2.02□□□□□ -2.09
MBD4-209ENST00000511009 LCN15Q6UWW0 184 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 LCA10Q71F78 164 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 C10orf126Q8N4M7 172 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 LINC00471Q8N535 108 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 OR4E2Q8NGC2 313 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 OR5A1Q8NGJ0 315 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 SPACA4Q8TDM5 124 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 FAM172AQ8WUF8 416 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 PYCARDQ9ULZ3 195 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 UTP11Q9Y3A2 253 aaKnown RBP2.02□□□□□ -2.09
MBD4-209ENST00000511009 CDK5RAP2Q96SN8 1893 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 CACNA1HO95180 2353 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 A0A0G2JMZ2 1700 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 ICE1Q9Y2F5 2266 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 MALRD1Q5VYJ5 2156 aa2.02□□□□□ -2.09
MBD4-209ENST00000511009 HIVEP2P31629 2446 aa2.01□□□□□ -2.09
MBD4-209ENST00000511009 MYH8P13535 1937 aa2.01□□□□□ -2.09
MBD4-209ENST00000511009 A0A087X0T9 212 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms