RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 IGHV3-23P01764 117 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 TRGV3P03979 118 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 CLEC3BP05452 202 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 S100A9P06702 114 aaKnown RBP6.26□□□□□ -1.41
COL4A5-208ENST00000505728 ADMP35318 185 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 RAB9AP51151 201 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 BLCAPP62952 87 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 RELQ04864 619 aaPredicted RBP6.26□□□□□ -1.41
COL4A5-208ENST00000505728 ZNF329Q86UD4 541 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 C2CD4CQ8TF44 421 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 MS4A10Q96PG2 267 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 ELOVL1Q9BW60 279 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 RABAC1Q9UI14 185 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 TMA7Q9Y2S6 64 aaKnown RBP6.26□□□□□ -1.41
COL4A5-208ENST00000505728 A0A0G2JLM5 398 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 PGPA6NDG6 321 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 BMPR1BO00238 502 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 IGHV4-59P01825 116 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 FOLR2P14207 255 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 GPR183P32249 361 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 RPL35P42766 123 aaKnown RBP6.25□□□□□ -1.41
COL4A5-208ENST00000505728 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
COL4A5-208ENST00000505728 FAM209BQ5JX69 171 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 LINC01551Q86U37 167 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 TMEM86BQ8N661 226 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 OR4F17Q8NGA8 305 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 OCC1Q8TAD7 63 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 CCDC140Q96MF4 163 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 CHRDL1Q9BU40 450 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 PRSS22Q9GZN4 317 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 LINC00527Q9UJ94 153 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 VPREB3Q9UKI3 123 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 EPDR1Q9UM22 224 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 ANK2Q01484 3957 aa6.25□□□□□ -1.41
COL4A5-208ENST00000505728 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 H7BYZ3 331 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 PEX7O00628 323 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 CRLF1O75462 422 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 CNN1P51911 297 aaKnown RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 TPPP2P59282 170 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 RANP62826 216 aaKnown RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 CFHR3Q02985 330 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 PDE6HQ13956 83 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 TOMM20LQ6UXN7 152 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 SPATA3Q8NHX4 192 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 BLNKQ8WV28 456 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 ISOC2Q96AB3 205 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 NOL4LQ96MY1 436 aaPredicted RBP6.24□□□□□ -1.41
COL4A5-208ENST00000505728 OR5B12Q96R08 314 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 DERL1Q9BUN8 251 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 Q9H3A6 140 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 ZNF586Q9NXT0 402 aa6.24□□□□□ -1.41
COL4A5-208ENST00000505728 TRBV20OR9-2A0A075B6H5 130 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.23□□□□□ -1.41
COL4A5-208ENST00000505728 CD5LO43866 347 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 CRYBA1P05813 215 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 PFN1P07737 140 aaKnown RBP6.23□□□□□ -1.41
COL4A5-208ENST00000505728 IGLC2P0DOY2 106 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 PF4V1P10720 104 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
COL4A5-208ENST00000505728 RAB5AP20339 215 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 S100PP25815 95 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 SRP14P37108 136 aaKnown RBP6.23□□□□□ -1.41
COL4A5-208ENST00000505728 GNG4P50150 75 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 ELOBQ15370 118 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 TMEM183BQ1AE95 376 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 C1orf194Q5T5A4 169 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 LEMD1Q68G75 181 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 Q6ZS46 218 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 BTF3L4Q96K17 158 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 GPR82Q96P67 336 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 IMMP2LQ96T52 175 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 NPFFR1Q9GZQ6 430 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 GNB4Q9HAV0 340 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 CDC42EP3Q9UKI2 254 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 KLF12Q9Y4X4 402 aa6.23□□□□□ -1.41
COL4A5-208ENST00000505728 TRBV24-1A0A075B6N3 115 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 C1orf196B1AJZ1 125 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 NDUFA4O00483 81 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
COL4A5-208ENST00000505728 ZNF253O75346 499 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 GCGP01275 180 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 IGHG4P01861 327 aa6.22□□□□□ -1.41
COL4A5-208ENST00000505728 ARL3P36405 182 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms