RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
VCAN-204ENST00000502527 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 A6NNC1 897 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 DIRC3C9JPN6 131 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 GNG7O60262 68 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 MFAP4P55083 255 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
VCAN-204ENST00000502527 MINOS1Q5TGZ0 78 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 ZNF48Q96MX3 618 aaPredicted RBP13.06□□□□□ -0.32
VCAN-204ENST00000502527 SSBP4Q9BWG4 385 aaPredicted RBP13.06□□□□□ -0.32
VCAN-204ENST00000502527 RNF114Q9Y508 228 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
VCAN-204ENST00000502527 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
VCAN-204ENST00000502527 PRNTQ86SH4 94 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
VCAN-204ENST00000502527 K7EQM0 130 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 COL8A1P27658 744 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 NIT1Q86X76 327 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 TTC9CQ8N5M4 171 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 PGLYRP4Q96LB8 373 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 FANCD2OSQ96PS1 177 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 IGF2RP11717 2491 aa13.05□□□□□ -0.32
VCAN-204ENST00000502527 TOX4O94842 621 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
VCAN-204ENST00000502527 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
VCAN-204ENST00000502527 Q8N976 141 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 TMEM75Q8N9X5 138 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 BORCS7Q96B45 105 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 MIEN1Q9BRT3 115 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 ZFP30Q9Y2G7 519 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 M0R143 59 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 HSBP1O75506 76 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 NTF3P20783 257 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 NHLH1Q02575 133 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 EBI3Q14213 229 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 DYNAPQ8N1N2 210 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 Q8N6K4 173 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 THYN1Q9P016 225 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 LRBAP50851 2863 aa13.04□□□□□ -0.32
VCAN-204ENST00000502527 EREGO14944 169 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 ZZEF1O43149 2961 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 ZFP36P26651 326 aaKnown RBP13.03□□□□□ -0.32
VCAN-204ENST00000502527 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 ABCA1O95477 2261 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
VCAN-204ENST00000502527 C3orf79P0CE67 100 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 Q56UQ5 140 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 ZNF705AQ6ZN79 300 aaPredicted RBP13.03□□□□□ -0.32
VCAN-204ENST00000502527 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 S4R3C0 116 aa13.03□□□□□ -0.32
VCAN-204ENST00000502527 TMEM11P17152 192 aa13.02□□□□□ -0.33
VCAN-204ENST00000502527 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.33
VCAN-204ENST00000502527 SCGB2A1O75556 95 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 RAB4AP20338 218 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 SSTP61278 116 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 NDPQ00604 133 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 PDE6HQ13956 83 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
VCAN-204ENST00000502527 MRPL52Q86TS9 123 aaKnown RBP13.01□□□□□ -0.33
VCAN-204ENST00000502527 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 PSG3Q16557 428 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 TACC2O95359 2948 aa13.01□□□□□ -0.33
VCAN-204ENST00000502527 M0R2Z0 102 aa13□□□□□ -0.33
VCAN-204ENST00000502527 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
VCAN-204ENST00000502527 ZC2HC1AQ96GY0 325 aa13□□□□□ -0.33
VCAN-204ENST00000502527 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
VCAN-204ENST00000502527 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
VCAN-204ENST00000502527 A0A1W2PPR1 153 aa13□□□□□ -0.33
VCAN-204ENST00000502527 F8W735 103 aaPredicted RBP13□□□□□ -0.33
VCAN-204ENST00000502527 HAX1O00165 279 aa13□□□□□ -0.33
VCAN-204ENST00000502527 CHEK1O14757 476 aa13□□□□□ -0.33
VCAN-204ENST00000502527 FAM106CPP0CH98 169 aa13□□□□□ -0.33
VCAN-204ENST00000502527 C1RLQ9NZP8 487 aa13□□□□□ -0.33
VCAN-204ENST00000502527 ARHGAP32A7KAX9 2087 aa13□□□□□ -0.33
VCAN-204ENST00000502527 M0QZK8 103 aa12.99□□□□□ -0.33
VCAN-204ENST00000502527 NDUFB8O95169 186 aa12.99□□□□□ -0.33
VCAN-204ENST00000502527 RNF224P0DH78 156 aa12.99□□□□□ -0.33
VCAN-204ENST00000502527 FAM181BA6NEQ2 426 aa12.98□□□□□ -0.33
VCAN-204ENST00000502527 ZNF785A8K8V0 405 aa12.98□□□□□ -0.33
VCAN-204ENST00000502527 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
VCAN-204ENST00000502527 UBTD1Q9HAC8 227 aa12.98□□□□□ -0.33
VCAN-204ENST00000502527 IGHV2-70DA0A0C4DH43 119 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms