RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DNM1P46Q6ZS02 220 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 WDR86Q86TI4 376 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 NEXN-AS1Q8NBZ9 246 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 FAM57AQ8TBR7 257 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 FGF13Q92913 245 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF689Q96CS4 500 aaPredicted RBP2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 PRSS27Q9BQR3 290 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 TM2D3Q9BRN9 247 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 SRXN1Q9BYN0 137 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 CMC2Q9NRP2 79 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 C4AP0C0L4 1744 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 C4BP0C0L5 1744 aa2.4□□□□□ -2.02
SNRNP48-202ENST00000496946 RGPD2P0DJD1 1756 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 IGHV1-58A0A0C4DH39 117 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 WI2-2373I1.2A0A1W2PRP0 233 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 hDV102S1A0JD36 115 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 C15orf62A8K5M9 175 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 SRSF10O75494 262 aaKnown RBP2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 NDUFB2O95178 105 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 SSR2P43308 183 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM30BQ3MIR4 351 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 NOXRED1Q6NXP6 359 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM57BQ71RH2 274 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 POM121L12Q8N7R1 296 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 OR2A5Q96R48 311 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 PARP12Q9H0J9 701 aaKnown RBP2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 DPH3P1Q9H4G8 78 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM60AQ9NP50 221 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 LAMA4Q16363 1823 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 ARFGEF2Q9Y6D5 1785 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 PATJQ8NI35 1801 aa2.4□□□□□ -2.03
SNRNP48-202ENST00000496946 TRAV8-1A0A0A6YYK1 113 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC01553A4QN01 128 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 K7EM74 188 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 PROP1O75360 226 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 APCSP02743 223 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 SCGB1C2P0DMR2 95 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 FCGR2CP31995 323 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 DOCK1Q14185 1865 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 MLF2Q15773 248 aaPredicted RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM120AOSQ5T036 256 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM222AQ5U5X8 452 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 UNQ9165/PRO28630Q6UXU0 137 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 Q6ZVQ6 151 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 SBSPONQ8IVN8 264 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 DOCK6Q96HP0 2047 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 MGST2Q99735 147 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 OVOL2Q9BRP0 275 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 DEFB127Q9H1M4 99 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 GNB4Q9HAV0 340 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 PLEKHA3Q9HB20 300 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 NINQ8N4C6 2090 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 ITGB4P16144 1822 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM131Q92545 1883 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 A0A087WZ39 114 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 TRAV1-2A0A0B4J238 106 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 LGALS9O00182 355 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 NDUFS5O43920 106 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 CST7O76096 145 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 ASAH2BP0C7U1 165 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 MYCNOSP40205 109 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC00205P59089 165 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 SNRPD3P62318 126 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 RPL23P62829 140 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 MRPS36P82909 103 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 PSMG4Q5JS54 123 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 SPANXN4Q5MJ08 99 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 OR5AS1Q8N127 324 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 GVQW1Q8N7I0 195 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 TSKUQ8WUA8 353 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 LRRC29Q8WV35 223 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 RPL36ALQ969Q0 106 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM230Q96A57 120 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 CKLFQ9UBR5 152 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM208AQ9UK61 1670 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 COL5A3P25940 1745 aaPredicted RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 TDRD15B5MCY1 1934 aaKnown RBP2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 DOCK7Q96N67 2140 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 MCM3APO60318 1980 aa2.39□□□□□ -2.03
SNRNP48-202ENST00000496946 PGPA6NDG6 321 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C2orf70A6NJV1 201 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 INS-IGF2F8WCM5 200 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 SLC25A14O95258 325 aaPredicted RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CPSF4O95639 269 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 HLA-DQA1P01909 254 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 LGALS3P17931 250 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 COL8A2P25067 703 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CACNG7P62955 275 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 UBE2L3P68036 154 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CCL20P78556 96 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF816Q0VGE8 651 aaPredicted RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C10orf25Q5T742 122 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 LGALS9CQ6DKI2 356 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 EBLN2Q6P2I7 272 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RPP25LQ8N5L8 163 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms