RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SNRPD3P62318 126 aaKnown RBP4.36□□□□□ -1.71
SNX13-210ENST00000494402 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
SNX13-210ENST00000494402 HSD52Q0P140 79 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 KLRD1Q13241 179 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 EBI3Q14213 229 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 LGALSLQ3ZCW2 172 aaPredicted RBP4.36□□□□□ -1.71
SNX13-210ENST00000494402 PATE2Q6UY27 113 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 AAED1Q7RTV5 226 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 GTSCR1Q86UQ5 136 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 KCNRGQ8N5I3 272 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 FAM216BQ8N7L0 139 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 UBALD1Q8TB05 177 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 COL5A2P05997 1499 aaPredicted RBP4.36□□□□□ -1.71
SNX13-210ENST00000494402 MYOM2P54296 1465 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 ABCC10Q5T3U5 1492 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 DLC1Q96QB1 1528 aa4.36□□□□□ -1.71
SNX13-210ENST00000494402 N4BP2Q86UW6 1770 aaPredicted RBP4.35□□□□□ -1.71
SNX13-210ENST00000494402 K7EM74 188 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 TNFP01375 233 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 GKN2Q86XP6 184 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 COPS9Q8WXC6 57 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 SAR1AQ9NR31 198 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 NHP2Q9NX24 153 aaKnown RBP4.35□□□□□ -1.71
SNX13-210ENST00000494402 MDFICQ9P1T7 246 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
SNX13-210ENST00000494402 RGS12O14924 1447 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 PZPP20742 1482 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 RIMBP3CA6NJZ7 1639 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 RIMBP3BA6NNM3 1639 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 RIMBP3Q9UFD9 1639 aa4.35□□□□□ -1.71
SNX13-210ENST00000494402 IGLV4-69A0A075B6H9 119 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 ZNF705BP0CI00 300 aaPredicted RBP4.34□□□□□ -1.71
SNX13-210ENST00000494402 COX6A1P12074 109 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 FUSP35637 526 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNX13-210ENST00000494402 CDK5R1Q15078 307 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 FGF13Q92913 245 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 RPRMQ9NS64 109 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 TIMM9Q9Y5J7 89 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 DNAJC15Q9Y5T4 150 aa4.34□□□□□ -1.71
SNX13-210ENST00000494402 KIF26BQ2KJY2 2108 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 A2ML1A8K2U0 1454 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 TRBV20-1A0A075B6N2 111 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 SYNGR2O43760 224 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 LINC01545Q5VT33 79 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 MAPK1IP1LQ8NDC0 245 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 Q8NDZ9 215 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 KLF14Q8TD94 323 aaPredicted RBP4.33□□□□□ -1.72
SNX13-210ENST00000494402 MRPS24Q96EL2 167 aaKnown RBP4.33□□□□□ -1.72
SNX13-210ENST00000494402 LINC00467Q9BRT7 94 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 TAS2R8Q9NYW2 309 aa4.33□□□□□ -1.72
SNX13-210ENST00000494402 TRPM1Q7Z4N2 1603 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 ZFYVE16Q7Z3T8 1539 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 RIC1Q4ADV7 1423 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 IGLV3-9A0A075B6K5 115 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 M0R129 80 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 TIMM17BO60830 172 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 COL8A2P25067 703 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 FXYD2P54710 66 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 CLLU1Q5K131 121 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 AQP3Q92482 292 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 SLC35B3Q9H1N7 401 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 NAA60Q9H7X0 242 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 FAM215AQ9Y5M1 114 aa4.32□□□□□ -1.72
SNX13-210ENST00000494402 SBF1O95248 1867 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 TRAV7A0A075B6U4 112 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 PANO1I0J062 215 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 YPEL1O60688 119 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 RBP4P02753 201 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 FOXF1Q12946 379 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 C10orf111Q8N326 155 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 CHCHD1Q96BP2 118 aaKnown RBP4.31□□□□□ -1.72
SNX13-210ENST00000494402 PKMYT1Q99640 499 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 BCL2L10Q9HD36 194 aa4.31□□□□□ -1.72
SNX13-210ENST00000494402 ARHGEF28Q8N1W1 1705 aaKnown RBP4.31□□□□□ -1.72
SNX13-210ENST00000494402 KIAA1107Q9UPP5 1409 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 NUP98P52948 1817 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 SRCAPQ6ZRS2 3230 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 TRGV5A0A0B4J1U4 118 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
SNX13-210ENST00000494402 CD14P08571 375 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 FABP4P15090 132 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 BLCAPP62952 87 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 CATR1Q13166 79 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 METTL1Q9UBP6 276 aaKnown RBP4.3□□□□□ -1.72
SNX13-210ENST00000494402 LSM2Q9Y333 95 aaKnown RBP4.3□□□□□ -1.72
SNX13-210ENST00000494402 LTBP4Q8N2S1 1624 aa4.3□□□□□ -1.72
SNX13-210ENST00000494402 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
SNX13-210ENST00000494402 NUP214P35658 2090 aaPredicted RBP4.3□□□□□ -1.72
SNX13-210ENST00000494402 SCN1AP35498 2009 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms