RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 C9orf153Q5TBE3 101 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 SPATA12Q7Z6I5 190 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 AMN1Q8IY45 258 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 ZFAND2AQ8N6M9 145 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 OTOSQ8NHW6 89 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 ITLN2Q8WWU7 325 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-212ENST00000494248 PSMF1Q92530 271 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 DIRC1Q969H9 104 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 RBMXL1Q96E39 390 aaKnown RBP1.49□□□□□ -2.17
PTPN12-212ENST00000494248 PKMYT1Q99640 499 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 C11orf1Q9H5F2 150 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 BET1LQ9NYM9 111 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 EPDR1Q9UM22 224 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 LINC00588Q9Y4M8 146 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 DNAJC15Q9Y5T4 150 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 SERP1Q9Y6X1 66 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 DOCK5Q9H7D0 1870 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 POLA1P09884 1462 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-212ENST00000494248 CEP164Q9UPV0 1460 aa1.49□□□□□ -2.17
PTPN12-212ENST00000494248 SBF1O95248 1867 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 NUP210Q8TEM1 1887 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 MED1Q15648 1581 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 THOC2Q8NI27 1593 aaKnown RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 TRGV5A0A0B4J1U4 118 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 IGHV1-3A0A0C4DH29 117 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 MCRIP1C9JLW8 97 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 K7ERJ3 54 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 INSP01308 110 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 IGHV3-7P01780 117 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 TRACP01848 142 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 HLA-DQA1P01909 254 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 RBP4P02753 201 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 IGHV4-34P06331 123 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 CGB3P0DN86 165 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 CGB7P0DN87 165 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 IL7P13232 177 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 HLA-DMBP28068 263 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 RPL26P61254 145 aaKnown RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 MRPS36P82909 103 aaKnown RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 IQCJQ1A5X6 159 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 FAM74A1Q5RGS3 127 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 OR2T2Q6IF00 324 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 C16orf47Q6ZP98 133 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 Q6ZUT4 128 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 PCP2Q8IVA1 136 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 C14orf178Q8N769 122 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 C15orf56Q8N910 161 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 KLHL30-AS1Q8NEE0 82 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 LINC01006Q8NI28 216 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 ZNF714Q96N38 554 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 SCGB3A1Q96QR1 104 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 UPK3BQ9BT76 320 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 PLA2G12AQ9BZM1 189 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 ATG5Q9H1Y0 275 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 TMEM106BQ9NUM4 274 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 LSM2Q9Y333 95 aaKnown RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 LINC00312Q9Y6C7 94 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 ABCC3O15438 1527 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 TOPBP1Q92547 1522 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 DLC1Q96QB1 1528 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 UBR2Q8IWV8 1755 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 CHD1O14646 1710 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 CCDC88BA6NC98 1476 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 COL1A1P02452 1464 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 MAGI2Q86UL8 1455 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 FYCO1Q9BQS8 1478 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
PTPN12-212ENST00000494248 TRPM1Q7Z4N2 1603 aa1.48□□□□□ -2.17
PTPN12-212ENST00000494248 FER1L5A0AVI2 2057 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 WNK3Q9BYP7 1800 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 ADGRB1O14514 1584 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 LRRK1Q38SD2 2015 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 SCN10AQ9Y5Y9 1956 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 ARHGAP5Q13017 1502 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 GPATCH8Q9UKJ3 1502 aaKnown RBP1.47□□□□□ -2.17
PTPN12-212ENST00000494248 PLXND1Q9Y4D7 1925 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 GRIFINA4D1Z8 144 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 ZFP92A6NM28 416 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 C17orf51A8MQB3 221 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 C3orf84H3BNL1 204 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 M0R129 80 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 SLC25A20O43772 301 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 OR1I1O60431 355 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 HYPMO75409 117 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 TCL1BO95988 128 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 NPYP01303 97 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 IGHV1-46P01743 117 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 GYPBP06028 91 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 P0C879 139 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 CCL3P10147 92 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 CD28P10747 220 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 CCL5P13501 91 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 TPT1P13693 172 aaKnown RBP1.47□□□□□ -2.17
PTPN12-212ENST00000494248 SLC25A16P16260 332 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 ZNF14P17017 642 aaPredicted RBP1.47□□□□□ -2.17
PTPN12-212ENST00000494248 Q0VG73 95 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 MIAQ16674 131 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 Q1RN00 199 aa1.47□□□□□ -2.17
PTPN12-212ENST00000494248 ASB16-AS1Q495Z4 193 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms