RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 LCNL1Q6ZST4 164 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 SSC4DQ8WTU2 575 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
BRAT1-206ENST00000493232 CRIM1Q9NZV1 1036 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 NDPQ00604 133 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 JPT2Q9H910 190 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 NCR2O95944 276 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
BRAT1-206ENST00000493232 NTF4P34130 210 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 KIF26BQ2KJY2 2108 aa13.28□□□□□ -0.28
BRAT1-206ENST00000493232 SAA4P35542 130 aa13.27□□□□□ -0.28
BRAT1-206ENST00000493232 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.28
BRAT1-206ENST00000493232 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 ZNF479Q96JC4 524 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 CST9LQ9H4G1 147 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 C15orf62A8K5M9 175 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 E7EQL1 145 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 RPRMLQ8N4K4 120 aa13.27□□□□□ -0.29
BRAT1-206ENST00000493232 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
BRAT1-206ENST00000493232 THADAQ6YHU6 1953 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 A8MWV9 139 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 HGFACQ04756 655 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 PDE6HQ13956 83 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 SRSF6Q13247 344 aaKnown RBP13.26□□□□□ -0.29
BRAT1-206ENST00000493232 GLRX5Q86SX6 157 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 PCP4P48539 62 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 C11orf68Q9H3H3 251 aaKnown RBP13.26□□□□□ -0.29
BRAT1-206ENST00000493232 K7ENP7 123 aa13.26□□□□□ -0.29
BRAT1-206ENST00000493232 IGHV3-64A0A075B6Q5 118 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 SFTA2Q6UW10 78 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 A0A0U1RRA0 63 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 FNDC4Q9H6D8 234 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-206ENST00000493232 IGHV3-73A0A0B4J1V6 119 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 UBE2E1P51965 193 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 Q8TAT8 98 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 SHANK2-AS3Q9BTD1 123 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 MSMBP08118 114 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 CXCL1P09341 107 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 HIST3H2BBQ8N257 126 aa13.25□□□□□ -0.29
BRAT1-206ENST00000493232 ERCC8Q13216 396 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
BRAT1-206ENST00000493232 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
BRAT1-206ENST00000493232 TMEM249Q2WGJ8 235 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 TRAV8-4A0A0B4J246 113 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 LOC105371267A0A1B0GV96 52 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 TNFSF13O75888 250 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 AMBPP02760 352 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
BRAT1-206ENST00000493232 ZNF562Q6V9R5 426 aa13.24□□□□□ -0.29
BRAT1-206ENST00000493232 DEFB121Q5J5C9 76 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 FAM110DQ8TAY7 271 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-206ENST00000493232 Q8TCH9 128 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 PAX4O43316 350 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 CACNA1DQ01668 2161 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 COLCA2A8K830 154 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
BRAT1-206ENST00000493232 OVOL3O00110 214 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 IGHV3-53P01767 116 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 LYL1P12980 280 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 Q86TA4 180 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 MRPL27Q9P0M9 148 aaKnown RBP13.22□□□□□ -0.29
BRAT1-206ENST00000493232 AKAP6Q13023 2319 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 NDUFB8O95169 186 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 GATA4P43694 442 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
BRAT1-206ENST00000493232 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-206ENST00000493232 FREM3P0C091 2139 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 SP5Q6BEB4 398 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-206ENST00000493232 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 FXYD7P58549 80 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 IGFL3Q6UXB1 125 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 RNF144BQ7Z419 303 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 ETV2O00321 342 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-206ENST00000493232 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
BRAT1-206ENST00000493232 OVOL2Q9BRP0 275 aa13.21□□□□□ -0.3
BRAT1-206ENST00000493232 PRB4P10163 310 aaPredicted RBP13.21□□□□□ -0.3
BRAT1-206ENST00000493232 C6orf226Q5I0X4 101 aa13.21□□□□□ -0.3
BRAT1-206ENST00000493232 PSCAO43653 123 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 LY6HO94772 140 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 C3orf56Q8N813 242 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 LMO1P25800 156 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 CFPP27918 469 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 YPEL3P61236 119 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-206ENST00000493232 GATD1Q8NB37 220 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 MYMXA0A1B0GTQ4 84 aa13.2□□□□□ -0.3
BRAT1-206ENST00000493232 SS18Q15532 418 aa13.19□□□□□ -0.3
BRAT1-206ENST00000493232 C5orf24Q7Z6I8 188 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms