RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 GUSBP1Q15486 140 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 PSG3Q16557 428 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 GTSCR1Q86UQ5 136 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 LINC00527Q9UJ94 153 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 SYS1-DBNDD2H3BUS1 97 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 IGHV4-39P01824 125 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 IGHG3P01860 377 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 CD33P20138 364 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 TOMM40O96008 361 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 SIGMAR1Q99720 223 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 GHRHP01286 108 aa11.99□□□□□ -0.49
EPHB4-206ENST00000487222 DMRTC2Q8IXT2 367 aaPredicted RBP11.99□□□□□ -0.49
EPHB4-206ENST00000487222 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
EPHB4-206ENST00000487222 PHF3Q92576 2039 aaKnown RBP11.99□□□□□ -0.49
EPHB4-206ENST00000487222 HEATR1Q9H583 2144 aaKnown RBP11.99□□□□□ -0.49
EPHB4-206ENST00000487222 ABCA4P78363 2273 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 SH2D1AO60880 128 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
EPHB4-206ENST00000487222 LY6DQ14210 128 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 KLF17Q5JT82 389 aaPredicted RBP11.98□□□□□ -0.49
EPHB4-206ENST00000487222 BUB1B-PAK6H3BSN5 160 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 EFNA4P52798 201 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
EPHB4-206ENST00000487222 hDV102S1A0JD36 115 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
EPHB4-206ENST00000487222 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 M0R1W7 72 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 ERG28Q9UKR5 140 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 MPV17L2Q567V2 206 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 ZNF329Q86UD4 541 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 KLRD1Q13241 179 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 CREBBPQ92793 2442 aa11.97□□□□□ -0.49
EPHB4-206ENST00000487222 SRD5A1P18405 259 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 LINC00477Q96M19 166 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 PFN1P07737 140 aaKnown RBP11.96□□□□□ -0.49
EPHB4-206ENST00000487222 Q0VG73 95 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 Q6ZS92 163 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 Q8TAT8 98 aa11.96□□□□□ -0.49
EPHB4-206ENST00000487222 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.5
EPHB4-206ENST00000487222 TRAV12-3A0A0B4J271 114 aa11.96□□□□□ -0.5
EPHB4-206ENST00000487222 IGKV1-16P04430 117 aa11.96□□□□□ -0.5
EPHB4-206ENST00000487222 MLANAQ16655 118 aa11.96□□□□□ -0.5
EPHB4-206ENST00000487222 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.5
EPHB4-206ENST00000487222 RSPO3Q9BXY4 272 aaPredicted RBP11.96□□□□□ -0.5
EPHB4-206ENST00000487222 LMO1P25800 156 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
EPHB4-206ENST00000487222 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 Q86TA4 180 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
EPHB4-206ENST00000487222 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 RIPPLY3P57055 190 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 FER1L5A0AVI2 2057 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 A0A087X0K7 114 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 SRRM4A7MD48 611 aaKnown RBP11.95□□□□□ -0.5
EPHB4-206ENST00000487222 MALP21145 153 aa11.95□□□□□ -0.5
EPHB4-206ENST00000487222 A0A0G2JNJ9 132 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 HTN3P15516 51 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 WFDC12Q8WWY7 111 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 PLEKHB2Q96CS7 222 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 Q9UFV3 132 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 TMEM219Q86XT9 240 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 CADP27708 2225 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 VCYO14598 125 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 NAA38Q9BRA0 125 aaKnown RBP11.94□□□□□ -0.5
EPHB4-206ENST00000487222 SLC25A20O43772 301 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 PDE6HQ13956 83 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
EPHB4-206ENST00000487222 ZNF474Q6S9Z5 364 aaPredicted RBP11.94□□□□□ -0.5
EPHB4-206ENST00000487222 M0R2P5 195 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 PAX9P55771 341 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 LINC00479Q96M42 142 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 ZNF407Q9C0G0 2248 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 SHANK2-AS3Q9BTD1 123 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 TRAV8-4A0A0B4J246 113 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 FXYD7P58549 80 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 DSCR9P59020 149 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 AMN1Q8IY45 258 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 TMEM158Q8WZ71 300 aa11.93□□□□□ -0.5
EPHB4-206ENST00000487222 FANCMQ8IYD8 2048 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 ADARB2-AS1A8MUL3 147 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 USF3Q68DE3 2245 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 COL4A6Q14031 1691 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 A0A1W2PPI3 338 aa11.92□□□□□ -0.5
EPHB4-206ENST00000487222 SRSF6Q13247 344 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms