RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 ARAP2Q8WZ64 1704 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 LTN1O94822 1766 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 MAST2Q6P0Q8 1798 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TRAV5A0A0B4J249 113 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 A0A0J9YX75 114 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 FAM236AA0A1B0GUQ0 79 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 FAM236BA0A1B0GV22 79 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TMEM269A0A1B0GVZ9 245 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 C7orf71A4D174 169 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 OR4C45A6NMZ5 311 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 ZNF670-ZNF695F2Z2N8 137 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 M0R129 80 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 M0R381 172 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 AIPO00170 330 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 PIRO00625 290 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 DPM2O94777 84 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 PMP2P02689 132 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 APODP05090 189 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CRYBA1P05813 215 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CD2P06729 351 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 GPX1P07203 203 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CTSDP07339 412 aaPredicted RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 PAEPP09466 180 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 UCHL1P09936 223 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 AKAIN1P0CW23 69 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 ZNF728P0DKX0 622 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 GZMBP10144 247 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 BCL2P10415 239 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 HLA-EP13747 358 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CCR2P41597 374 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 INSL3P51460 131 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 MP68P56378 58 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 LINC00313P59037 77 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 DAD1P61803 113 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 FKBP1AP62942 108 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 HERVK_113P63121 156 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 PDGFRLQ15198 375 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 VMA21Q3ZAQ7 101 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 FAM229BQ4G0N7 80 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 MEIG1Q5JSS6 88 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CLLU1Q5K131 121 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 HES3Q5TGS1 186 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 GTF2H5Q6ZYL4 71 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 PLPP5Q8NEB5 264 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 OR4S1Q8NGB4 309 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 OR52R1Q8NGF1 315 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 OR5A2Q8NGI9 324 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 DCANP1Q8TF63 244 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 MAGOHBQ96A72 148 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 BORCS8Q96FH0 119 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 AP1S3Q96PC3 154 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 GPX7Q96SL4 187 aaPredicted RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 SDF2Q99470 211 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TMEM70Q9BUB7 260 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 DERL1Q9BUN8 251 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 C1QTNF6Q9BXI9 259 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 REG4Q9BYZ8 158 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TMEM133Q9H2Q1 129 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 C11orf68Q9H3H3 251 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 RNF122Q9H9V4 155 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 OTORQ9NRC9 128 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TMEM216Q9P0N5 145 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 COMMD3Q9UBI1 195 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 SOX21Q9Y651 276 aaPredicted RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 MINOS1-NBL1R4GNA1 71 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 HELZP42694 1942 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 TCHHQ07283 1943 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 PTPRBP23467 1997 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 TNRC6AQ8NDV7 1962 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 SCN8AQ9UQD0 1980 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 SNRNP200O75643 2136 aaKnown RBP1.04□□□□□ -2.24
VPS50-213ENST00000477572 DCCP43146 1447 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 FMN1Q68DA7 1419 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CCDC88BA6NC98 1476 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 CAMSAP2Q08AD1 1489 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 GAPVD1Q14C86 1478 aa1.04□□□□□ -2.24
VPS50-213ENST00000477572 MAP2P11137 1827 aaKnown RBP1.03□□□□□ -2.24
VPS50-213ENST00000477572 PCDH15Q96QU1 1955 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TANC2Q9HCD6 1990 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TRBV19A0A075B6N1 114 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TRAV8-1A0A0A6YYK1 113 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 IGKV1D-43A0A0B4J1Z2 117 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TRAV41A0A0B4J266 112 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 A0A0G2JMM0 328 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 A0A1W2PPB8 328 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 ODAMA1E959 279 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 GGT3PA6NGU5 568 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 ZNF860A6NHJ4 632 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 A8MUN3 132 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 KIR3DP1A8MWS1 328 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 TMEM250H0YL14 139 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 H3BRN7 92 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 J3QR89 54 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LST1O00453 97 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 LYZL6O75951 148 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 IFNA7P01567 189 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 CD14P08571 375 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SMIM10L2AP0DMW4 78 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 SMIM10L2BP0DMW5 78 aa1.03□□□□□ -2.24
VPS50-213ENST00000477572 IL7P13232 177 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms