RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 SNX29P2Q8IUI4 249 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ARL17AQ8IVW1 177 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MSRB3Q8IXL7 192 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C4orf33Q8N1A6 199 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C10orf111Q8N326 155 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPRMLQ8N4K4 120 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPP25LQ8N5L8 163 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ACBD7Q8N6N7 88 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C5orf17Q8NAS9 161 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 OR4X2Q8NGF9 303 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 OR10AC1Q8NH08 325 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 UBALD1Q8TB05 177 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PHOSPHO2Q8TCD6 241 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF418Q8TF45 676 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MAL2Q969L2 176 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CHCHD1Q96BP2 118 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FAM19A4Q96LR4 140 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGF2BP2-AS1Q96M15 143 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IP6K3Q96PC2 410 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 AQP10Q96PS8 301 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 OR4C12Q96R67 309 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 OR8B2Q96RD0 313 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GPX7Q96SL4 187 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IMMP2LQ96T52 175 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GGACTQ9BVM4 153 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LINC00470Q9BZP3 86 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 AICDAQ9GZX7 198 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CST11Q9H112 138 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BCL2L10Q9HD36 194 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 NIT2Q9NQR4 276 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C8orf17Q9NRJ1 99 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CBLN4Q9NTU7 201 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF492Q9P255 531 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 COMMD3Q9UBI1 195 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 METTL1Q9UBP6 276 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 JPT1Q9UK76 154 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ERG28Q9UKR5 140 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPL26L1Q9UNX3 145 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HHLA3Q9XRX5 114 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZFP30Q9Y2G7 519 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MRPS16Q9Y3D3 137 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TIMM22Q9Y584 194 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RFNGQ9Y644 331 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HSPE1-MOB4S4R3N1 261 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 V9GYS6 101 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PCF11O94913 1555 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 KDM5CP41229 1560 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BAZ1AQ9NRL2 1556 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 WDR62O43379 1518 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 UHRF1BP1LA0JNW5 1464 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PLA2R1Q13018 1463 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TCOF1Q13428 1488 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MRC2Q9UBG0 1479 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CITO14578 2027 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BCL9O00512 1426 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TECPR2O15040 1411 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TNS2Q63HR2 1409 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SETD5Q9C0A6 1442 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TRAPPC8Q9Y2L5 1435 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 NCOA3Q9Y6Q9 1424 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MYH9P35579 1960 aaKnown RBP0.46□□□□□ -2.34
HDAC9-222ENST00000474742 YLPM1P49750 1951 aaKnown RBP0.46□□□□□ -2.34
HDAC9-222ENST00000474742 CPDO75976 1380 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 SCRIBQ14160 1630 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 ZCCHC11Q5TAX3 1644 aaKnown RBP0.46□□□□□ -2.34
HDAC9-222ENST00000474742 ECM29Q5VYK3 1845 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRBV20-1A0A075B6N2 111 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 IGHV3-64A0A075B6Q5 118 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV7A0A075B6U4 112 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV30A0A087WSZ9 112 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV27A0A087WT01 109 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1-6A0A0C4DH72 117 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 A0A0D9SEW6 157 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRBV7-6A0A0J9YX20 115 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 A0A0J9YX75 114 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRBV27A0A0K0K1C4 114 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TRBV10-2A0A0K0K1G8 114 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 A0A1B0GVX0 72 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 PVALEFA0A1B0GWK0 134 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TCRBV3S1A0A5B6 114 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 TCRBV4S1A1TA0A5B7 111 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 C11orf86A6NJI1 115 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 IFITM5A6NNB3 132 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 A8MWP4 228 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 F8W1H4 67 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 G3V3Q6 166 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 H3BMM0 161 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 C3orf84H3BNL1 204 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 H3BQ85 93 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 K7EM74 188 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 K7EP13 123 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 CORTO00230 105 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 NPFFO15130 113 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 SOCS1O15524 211 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 GNRH2O43555 120 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 NDUFA2O43678 99 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
HDAC9-222ENST00000474742 ERC2-IT1O76042 136 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 NDUFB6O95139 128 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 UBL3O95164 117 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms