RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 ROMO1P60602 79 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 FP248Q71RG6 208 aaPredicted RBP2.03□□□□□ -2.08
CCDC66-215ENST00000473322 AIF1LQ9BQI0 150 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 CYSTM1Q9H1C7 97 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 OR5AC2Q9NZP5 309 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 NAT8BQ9UHF3 227 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 LY96Q9Y6Y9 160 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 NCKAP5O14513 1909 aa2.03□□□□□ -2.08
CCDC66-215ENST00000473322 FHAD1B1AJZ9 1412 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 RTL9Q8NET4 1388 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 A0A087WSZ3 146 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 ASAH2BP0C7U1 165 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 MGST1P10620 155 aaKnown RBP2.02□□□□□ -2.09
CCDC66-215ENST00000473322 SSR2P43308 183 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 TMBIM6P55061 237 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 ARPP19P56211 112 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 LINC00311Q8N616 119 aa2.02□□□□□ -2.09
CCDC66-215ENST00000473322 A0A087WX48 190 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 BORCS7-ASMTA0A0B4J1R7 106 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 TRAV1-1A0A0B4J248 108 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 C2orf70A6NJV1 201 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 MRPS14O60783 128 aaKnown RBP2.01□□□□□ -2.09
CCDC66-215ENST00000473322 CXCL1P09341 107 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 S100A11P31949 105 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 DSCR4P56555 118 aaPredicted RBP2.01□□□□□ -2.09
CCDC66-215ENST00000473322 LINC00301Q8NCQ3 95 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 SFT2D1Q8WV19 159 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 C4orf3Q8WVX3 66 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 MYH7BA7E2Y1 1941 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
CCDC66-215ENST00000473322 NUMA1Q14980 2115 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 PIK3C2AO00443 1686 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 RPL7P18124 248 aaKnown RBP2□□□□□ -2.09
CCDC66-215ENST00000473322 RPS3P23396 243 aaKnown RBP eCLIP2□□□□□ -2.09
CCDC66-215ENST00000473322 NDUFA6P56556 154 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 Q96M85 177 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 MED9Q9NWA0 146 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 JPT1Q9UK76 154 aa2□□□□□ -2.09
CCDC66-215ENST00000473322 DOCK4Q8N1I0 1966 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 E7EUB6 86 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 GABARAPH6UMI1 98 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 CRPP02741 224 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 SRP9P49458 86 aaKnown RBP1.99□□□□□ -2.09
CCDC66-215ENST00000473322 RAB5CP51148 216 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 KLRD1Q13241 179 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 MSMO1Q15800 293 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 C10orf55Q5SWW7 151 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 DIRC1Q969H9 104 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 ZNF714Q96N38 554 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 LXNQ9BS40 222 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 RASL12Q9NYN1 266 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 TAS2R7Q9NYW3 318 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 RTTNQ86VV8 2226 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 COL4A5P29400 1685 aa1.99□□□□□ -2.09
CCDC66-215ENST00000473322 KDM6AO15550 1401 aaPredicted RBP1.99□□□□□ -2.09
CCDC66-215ENST00000473322 FN1P02751 2386 aaKnown RBP1.98□□□□□ -2.09
CCDC66-215ENST00000473322 ODAMA1E959 279 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 J3KT08 172 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 DEGS1O15121 323 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 RER1O15258 196 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 SCTP09683 121 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 RNASE3P12724 160 aaKnown RBP1.98□□□□□ -2.09
CCDC66-215ENST00000473322 BRS3P32247 399 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 SDC2P34741 201 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 RNASE10Q5GAN6 216 aaKnown RBP1.98□□□□□ -2.09
CCDC66-215ENST00000473322 TMEM229BQ8NBD8 167 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 RETNLBQ9BQ08 111 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 TNS3Q68CZ2 1445 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 KIAA1107Q9UPP5 1409 aa1.98□□□□□ -2.09
CCDC66-215ENST00000473322 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 TRAV36DV7A0A075B6V5 113 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 TRAV3A0A0B4J244 114 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 TRBV6-5A0A0K0K1A5 114 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 IGLV1-51P01701 117 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 ZNF93P35789 620 aaPredicted RBP1.97□□□□□ -2.09
CCDC66-215ENST00000473322 CNBPP62633 177 aaKnown RBP1.97□□□□□ -2.09
CCDC66-215ENST00000473322 S100A12P80511 92 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 MRPS36P82909 103 aaKnown RBP1.97□□□□□ -2.09
CCDC66-215ENST00000473322 DEFB115Q30KQ5 88 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 OR2T35Q8NGX2 323 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 TMEM254Q8TBM7 123 aa1.97□□□□□ -2.09
CCDC66-215ENST00000473322 CHCHD2Q9Y6H1 151 aaPredicted RBP1.97□□□□□ -2.09
CCDC66-215ENST00000473322 NUP98P52948 1817 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 EML6Q6ZMW3 1958 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 TRAV27A0A087WT01 109 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 TRAV14DV4A0A0A6YYC5 116 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 DBIP07108 87 aaKnown RBP1.96□□□□□ -2.1
CCDC66-215ENST00000473322 KRTAP26-1Q6PEX3 210 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 FAM216BQ8N7L0 139 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 OR4K15Q8NH41 348 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 CCL4L1Q8NHW4 92 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 CHCHD1Q96BP2 118 aaKnown RBP1.96□□□□□ -2.1
CCDC66-215ENST00000473322 HYLS1Q96M11 299 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 COL5A3P25940 1745 aaPredicted RBP1.96□□□□□ -2.1
CCDC66-215ENST00000473322 CCDC88AQ3V6T2 1871 aa1.96□□□□□ -2.1
CCDC66-215ENST00000473322 BRWD1Q9NSI6 2320 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms