RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LRRC29Q8WV35 223 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 IL36BQ9NZH7 164 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
COL3A1-205ENST00000470167 LOC285556D6RIA3 1793 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 MAST2Q6P0Q8 1798 aa4.01□□□□□ -1.77
COL3A1-205ENST00000470167 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.01□□□□□ -1.77
COL3A1-205ENST00000470167 GPR179Q6PRD1 2367 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 EPG5Q9HCE0 2579 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 IGHV1-58A0A0C4DH39 117 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 A0A1B0GXF2 115 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 TCRAP04437 139 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF20P17024 532 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 RPL34P49207 117 aaKnown RBP4□□□□□ -1.77
COL3A1-205ENST00000470167 CRYBA2P53672 197 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 LAGE3Q14657 143 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 SCGB1D4Q6XE38 83 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 FP248Q71RG6 208 aaPredicted RBP4□□□□□ -1.77
COL3A1-205ENST00000470167 LINC00305Q7Z4B0 112 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 TMEM158Q8WZ71 300 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 CHCHD1Q96BP2 118 aaKnown RBP4□□□□□ -1.77
COL3A1-205ENST00000470167 NMNAT3Q96T66 252 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 LIME1Q9H400 295 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 DEPPQ9NTK1 212 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 GNG13Q9P2W3 67 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 V9GY05 133 aa4□□□□□ -1.77
COL3A1-205ENST00000470167 CEP290O15078 2479 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 NUP205Q92621 2012 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 NRXN2Q9P2S2 1712 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 TRAV8-2A0A0B4J237 113 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 TRAV8-4A0A0B4J246 113 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 A0A0D9SEW6 157 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 hADV29S1A0JD25 119 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 TMEM202A6NGA9 273 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 SNURFLB1AK76 121 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 K7ESM1 405 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 LGALS9O00182 355 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 BMPR1BO00238 502 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 TIMM23O14925 209 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 SYNGR2O43760 224 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 SLC25A14O95258 325 aaPredicted RBP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 PEBP1P30086 187 aaKnown RBP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 SUB1P53999 127 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 FXYD2P54710 66 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 SMIM11AP58511 58 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 CCL8P80075 99 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 CST6Q15828 149 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 UNQ9165/PRO28630Q6UXU0 137 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 HMGN2P46Q86SG4 172 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 C5orf38Q86SI9 138 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 LINC01555Q8NAE3 123 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 C10orf105Q8TEF2 133 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 TSACCQ96A04 125 aaPredicted RBP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF503Q96F45 646 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 MGST2Q99735 147 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 CHAC1Q9BUX1 264 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 DEFB127Q9H1M4 99 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 LY96Q9Y6Y9 160 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 EYSQ5T1H1 3165 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 DLEC1Q9Y238 1755 aa3.99□□□□□ -1.77
COL3A1-205ENST00000470167 LAMA2P24043 3122 aaKnown RBP3.99□□□□□ -1.77
COL3A1-205ENST00000470167 CPAMD8Q8IZJ3 1885 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 IGLV3-22A0A075B6J6 115 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 TRGV11A0A075B6L2 103 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 TRAV8-1A0A0A6YYK1 113 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 TCRBV4S1A1TA0A5B7 111 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 PRR32B1ATL7 298 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 UPK2O00526 184 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 TRIAP1O43715 76 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 ACYP1P07311 99 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 CXCL8P10145 99 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 ZFP36P26651 326 aaKnown RBP3.98□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF136P52737 540 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 EFNA4P52798 201 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 UBE2D3P61077 147 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 DAD1P61803 113 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 UBE2D2P62837 147 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 RPL30P62888 115 aaKnown RBP3.98□□□□□ -1.77
COL3A1-205ENST00000470167 DYNLT1P63172 113 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 PLPP4Q5VZY2 271 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 ABHD14BQ96IU4 210 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 C11orf1Q9H5F2 150 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 CKLFQ9UBR5 152 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 KLK13Q9UKR3 277 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 CKAP5Q14008 2032 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 ZDBF2Q9HCK1 2354 aa3.98□□□□□ -1.77
COL3A1-205ENST00000470167 TDRD15B5MCY1 1934 aaKnown RBP3.97□□□□□ -1.77
COL3A1-205ENST00000470167 MIA3Q5JRA6 1907 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 ZNF462Q96JM2 2506 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 MCM3APO60318 1980 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms