RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CDC42SE1Q9NRR8 79 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 MED9Q9NWA0 146 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 ASB4Q9Y574 426 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 SNURFQ9Y675 71 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 LY96Q9Y6Y9 160 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 TCRBV4S1A1TA0A5B7 111 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 TLCD2A6NGC4 264 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 H0YJX3 145 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 RER1O15258 196 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 ROMO1P60602 79 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 ST6GALNAC3Q8NDV1 305 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 POP5Q969H6 163 aaKnown RBP1.41□□□□□ -2.18
VPS13A-209ENST00000467124 PLEKHB2Q96CS7 222 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 BORCS8Q96FH0 119 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 TEX37Q96LM6 180 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 CYSTM1Q9H1C7 97 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 OTORQ9NRC9 128 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 ATPIF1Q9UII2 106 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 OTOGLQ3ZCN5 2332 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 SYNMO15061 1565 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 COL4A5P29400 1685 aa1.41□□□□□ -2.18
VPS13A-209ENST00000467124 MYO5AQ9Y4I1 1855 aaKnown RBP1.41□□□□□ -2.18
VPS13A-209ENST00000467124 A0A1B0GV72 72 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 ZNF736B4DX44 427 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-209ENST00000467124 M0R233 179 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 DHFRP00374 187 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 IFNA21P01568 189 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 RTL8BQ17RB0 113 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 C1orf140Q5VVS0 124 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 RAB37Q96AX2 223 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 RMND5BQ96G75 393 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-209ENST00000467124 RTL8AQ9BWD3 113 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 CACYBPQ9HB71 228 aaKnown RBP1.4□□□□□ -2.19
VPS13A-209ENST00000467124 MYH3P11055 1940 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 ARHGEF11O15085 1522 aa1.4□□□□□ -2.19
VPS13A-209ENST00000467124 SBF1O95248 1867 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 LAMB2P55268 1798 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 ROCK1Q13464 1354 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 MYH2Q9UKX2 1941 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 TRBV6-7A0A0A0MS04 114 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 DNAL4O96015 105 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 B2MP61769 119 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 KLRD1Q13241 179 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 EIF3IQ13347 325 aaKnown RBP1.39□□□□□ -2.19
VPS13A-209ENST00000467124 SMIM15Q7Z3B0 74 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 LINC00467Q9BRT7 94 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 RASL12Q9NYN1 266 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 ZFP30Q9Y2G7 519 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 MYH10P35580 1976 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 PBRM1Q86U86 1689 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 SCN3AQ9NY46 2000 aa1.39□□□□□ -2.19
VPS13A-209ENST00000467124 EML6Q6ZMW3 1958 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 RP1L1Q8IWN7 2480 aaPredicted RBP1.38□□□□□ -2.19
VPS13A-209ENST00000467124 TRAV10A0A0B4J240 114 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 A0A1W2PRE2 83 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
VPS13A-209ENST00000467124 IGLV1-51P01701 117 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 MT-ND6P03923 174 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 ZNF25P17030 456 aaPredicted RBP1.38□□□□□ -2.19
VPS13A-209ENST00000467124 HBBP68871 147 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 SPRNQ5BIV9 151 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 HRCT1Q6UXD1 115 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 C4orf22Q6V702 233 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 Q8N814 137 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 NUP35Q8NFH5 326 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 OR5D16Q8NGK9 328 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 Q8TAT8 98 aa1.38□□□□□ -2.19
VPS13A-209ENST00000467124 CHCHD2Q9Y6H1 151 aaPredicted RBP1.38□□□□□ -2.19
VPS13A-209ENST00000467124 CEP192Q8TEP8 1941 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 A0A087WX48 190 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 OR2T8A6NH00 312 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 GABARAPH6UMI1 98 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 H7BYZ3 331 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 HIST1H2BKO60814 126 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 HIST1H2BJP06899 126 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 CDK6Q00534 326 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 PLCXD2Q0VAA5 305 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 BORCS5Q969J3 196 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 NAT8BQ9UHF3 227 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 TECPR2O15040 1411 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 CD109Q6YHK3 1445 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 POLEQ07864 2286 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 NUP210LQ5VU65 1888 aa1.37□□□□□ -2.19
VPS13A-209ENST00000467124 N4BP2Q86UW6 1770 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-209ENST00000467124 TRDV1A0A1B0GX56 115 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 CST7O76096 145 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 OR10J4P0C629 311 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 FABP2P12104 132 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 S100A11P31949 105 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 TMEM14EPQ6UXP3 125 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 GKN2Q86XP6 184 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 EFCAB11Q9BUY7 163 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 SMPXQ9UHP9 88 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 TRAPPC2LQ9UL33 140 aa1.36□□□□□ -2.19
VPS13A-209ENST00000467124 YTHDC2Q9H6S0 1430 aaKnown RBP1.35□□□□□ -2.19
VPS13A-209ENST00000467124 C5orf67F2Z3F1 127 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms