RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 CENPWQ5EE01 88 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 ADAMTSL4-AS1Q5T5F5 129 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 LINC00242Q5T6M2 205 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 FAM222AQ5U5X8 452 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 ZNF322Q6U7Q0 402 aaPredicted RBP2.46□□□□□ -2.02
SNX4-202ENST00000465505 WDR86Q86TI4 376 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 C10orf126Q8N4M7 172 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 ZNF709Q8N972 641 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 COMMD5Q9GZQ3 224 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 SIX2Q9NPC8 291 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 AIG1Q9NVV5 245 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 PCTPQ9UKL6 214 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 VSIG4Q9Y279 399 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 SPCS1Q9Y6A9 102 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 KDM6BO15054 1643 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 LRP5O75197 1615 aa2.46□□□□□ -2.02
SNX4-202ENST00000465505 ARID1AO14497 2285 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PLXNB1O43157 2135 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PKD1L3Q7Z443 1732 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 UBR1Q8IWV7 1749 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 CEP170Q5SW79 1584 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 C10orf71Q711Q0 1435 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 RREB1Q92766 1687 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 ANKRD36A6QL64 1941 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 DLG5Q8TDM6 1919 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 IGKV1D-8A0A087WSZ0 117 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 TRAV9-2A0A087WT02 112 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 TRAV13-1A0A0B4J241 112 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 IGKV6D-41A0A0C4DH26 115 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 KANTRA0A1W2PQU2 76 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 A8MWV9 139 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 C11orf98E9PRG8 122 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 SYS1-DBNDD2H3BUS1 97 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 APOC4-APOC2K7ER74 178 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 FSTL3O95633 263 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 APOC2P02655 101 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 GYPBP06028 91 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PSMB3P49720 205 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 INSL3P51460 131 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 P2RX1P51575 399 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 RPS18P62269 152 aaKnown RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 LGALS9BQ3B8N2 356 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 MPV17L2Q567V2 206 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 SLC25A34Q6PIV7 304 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 Q6ZS49 121 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PHF5AQ7RTV0 110 aaKnown RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 PCP2Q8IVA1 136 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 SLC22A24Q8N4F4 322 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 RPP25LQ8N5L8 163 aaKnown RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 DRAM1Q8N682 238 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 RNF182Q8N6D2 247 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 C15orf53Q8NAA6 179 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 C11orf72Q8NBR9 251 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 OR10P1Q8NGE3 313 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 OR2T10Q8NGZ9 312 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 ZNF564Q8TBZ8 553 aaPredicted RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 ZNF721Q8TF20 911 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PPDPFLQ8WWR9 84 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PRELID3AQ96N28 172 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 SPACA5Q96QH8 159 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 EIF5A2Q9GZV4 153 aaKnown RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 ESM1Q9NQ30 184 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 ZNF71Q9NQZ8 489 aaPredicted RBP2.45□□□□□ -2.02
SNX4-202ENST00000465505 DEPPQ9NTK1 212 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 OBSL1O75147 1896 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 WDR90Q96KV7 1748 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 MRC1P22897 1456 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PTPRMP28827 1452 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 SLX4Q8IY92 1834 aa2.45□□□□□ -2.02
SNX4-202ENST00000465505 PCNX3Q9H6A9 2034 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 KIAA2026Q5HYC2 2103 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 IGHV1OR21-1A0A087WYE8 117 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 TRBV6-7A0A0A0MS04 114 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 TRAV8-1A0A0A6YYK1 113 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 A0A0D9SFI3 127 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 UMAD1C9J7I0 102 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 C9JQL5 133 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 H3BT86 120 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 K7N7A8 449 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 ZNF737O75373 536 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 SNCGO76070 127 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 TRACP01848 142 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 HSPB1P04792 205 aaKnown RBP2.44□□□□□ -2.02
SNX4-202ENST00000465505 TPT1P13693 172 aaKnown RBP2.44□□□□□ -2.02
SNX4-202ENST00000465505 CBLN1P23435 193 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 CXCL5P42830 114 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 TAS2R45P59539 299 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 MRPS36P82909 103 aaKnown RBP2.44□□□□□ -2.02
SNX4-202ENST00000465505 NSUN5P1Q3KNT7 163 aa2.44□□□□□ -2.02
SNX4-202ENST00000465505 FBXL19-AS1Q494R0 122 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms