RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 X6R8D5 127 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 ATP5LO75964 103 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 ZFAND5O76080 213 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 NDUFA7O95182 113 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 CD52P31358 61 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 LOXL1Q08397 574 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-205ENST00000463753 RUNX3Q13761 415 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 OR1C1Q15619 314 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 LRRC75A-AS1Q8N1F1 130 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 WIPF2Q8TF74 440 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-205ENST00000463753 FGF14Q92915 247 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 TM4SF19Q96DZ7 209 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 LYZL4Q96KX0 146 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 DUX3Q96PT4 197 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 PROCRQ9UNN8 238 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 LY96Q9Y6Y9 160 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 HTTP42858 3142 aa2.9□□□□□ -1.95
COL8A1-205ENST00000463753 NCOA6Q14686 2063 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-205ENST00000463753 LIPT2A6NK58 231 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 TNFSF11O14788 317 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MED14OSP0DP75 135 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 KIR2DS2P43631 304 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 RPL30P62888 115 aaKnown RBP2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 VN1R4Q7Z5H5 301 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 FGFRL1Q8N441 504 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MRAPQ8TCY5 172 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 ST8SIA1Q92185 356 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 BORCS8Q96FH0 119 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 SPANXA1Q9NS26 97 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MDFICQ9P1T7 246 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MAST4O15021 2626 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 RBAKDNA6NC62 111 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 LINC01549A6NIU2 74 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 GGTLC3B5MD39 225 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 PAX4O43316 350 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 HOXA3O43365 443 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-205ENST00000463753 IGLV2-8P01709 118 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 CD3EP07766 207 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 CD7P09564 240 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 SCGB1C2P0DMR2 95 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 ORM2P19652 201 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 MPV17P39210 176 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 PRR30Q53SZ7 412 aaPredicted RBP2.89□□□□□ -1.95
COL8A1-205ENST00000463753 C2orf27AQ580R0 203 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 TRPT1Q86TN4 253 aaKnown RBP2.89□□□□□ -1.95
COL8A1-205ENST00000463753 SLC22A18ASQ8N1D0 253 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 C11orf52Q96A22 123 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 RTTNQ86VV8 2226 aa2.89□□□□□ -1.95
COL8A1-205ENST00000463753 HCFC1P51610 2035 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IGKV1-27A0A075B6S5 117 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TMED7-TICAM2A0A0A6YYA0 188 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TRAV2A0A0B4J234 112 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IGKV1-6A0A0C4DH72 117 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IGKV1-12A0A0C4DH73 117 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TINCRA0A1B0GVN0 87 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TMEM213A2RRL7 107 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IGKV1D-12P01611 117 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 GNLYP22749 145 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IFI27P40305 119 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 HSPE1P61604 102 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 EFNB3Q15768 340 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF56Q15929 161 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 UTF1Q5T230 341 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 TMEM158Q8WZ71 300 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 RNF125Q96EQ8 232 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF488Q96MN9 340 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 MGST2Q99735 147 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 NCKAP5O14513 1909 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 CACNA1HO95180 2353 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 A0A1W2PRX2 142 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 C15orf62A8K5M9 175 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 H3BML4 177 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 PSPNO60542 156 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 CECR9P0C854 216 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF415Q09FC8 603 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 LGALS9BQ3B8N2 356 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 LGALS9CQ6DKI2 356 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF493Q6ZR52 646 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ABHD12Q8N2K0 398 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 FAM57AQ8TBR7 257 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 WDR83OSQ9Y284 106 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 MED12Q93074 2177 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 HELZ2Q9BYK8 2649 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ASCC3Q8N3C0 2202 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 PMS2P5A8MQ11 134 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 DUSP14O95147 198 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 ORM1P02763 201 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 PRSS1P07477 247 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 HHEXQ03014 270 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 RSPO1Q2MKA7 263 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 GAGE2AQ6NT46 116 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 MORN3Q6PF18 240 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 Q6ZS49 121 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 Q8N7P7 452 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms