RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.02□□□□□ -1.29
HDAC3-202ENST00000459727 A0A1B0GUT8 65 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 WI2-2373I1.2A0A1W2PRP0 233 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 FAM181BA6NEQ2 426 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 FAM90A27PA6NNH2 459 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 K7EIM0 57 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 CCL21O00585 134 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 EREGO14944 169 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 CA1P00915 261 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-202ENST00000459727 IGKV1-17P01599 117 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 HLA-DRB1P01911 266 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
HDAC3-202ENST00000459727 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 IGLC2P0DOY2 106 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 RPL7P18124 248 aaKnown RBP7.02□□□□□ -1.29
HDAC3-202ENST00000459727 CDKN1AP38936 164 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 CTRLP40313 264 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 GAGE1Q13065 139 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 C5orf64Q2M2E5 130 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 SPATA45Q537H7 98 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 SAPCD1Q5SSQ6 148 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
HDAC3-202ENST00000459727 ZNF562Q6V9R5 426 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 OR2D3Q8NGH3 330 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 CFHR4Q92496 578 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 RITA1Q96K30 269 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 RPH3ALQ9UNE2 315 aa7.02□□□□□ -1.29
HDAC3-202ENST00000459727 TRAV9-2A0A087WT02 112 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 F2Z2F3 143 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 CRXO43186 299 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-202ENST00000459727 IGHV3-48P01763 117 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 SFTPCP11686 197 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 NTF3P20783 257 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 COL8A2P25067 703 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 CNTFRP26992 372 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 CAMPP49913 170 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 HNRNPA3P51991 378 aaKnown RBP7.01□□□□□ -1.29
HDAC3-202ENST00000459727 EBI3Q14213 229 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 PSG3Q16557 428 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 PRR30Q53SZ7 412 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-202ENST00000459727 GOLT1AQ6ZVE7 132 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 COX8CQ7Z4L0 72 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 NIT1Q86X76 327 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 TTC9CQ8N5M4 171 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 Q8N976 141 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 FAM168AQ92567 244 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 RCHY1Q96PM5 261 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 TMEM70Q9BUB7 260 aa7.01□□□□□ -1.29
HDAC3-202ENST00000459727 MRPS16Q9Y3D3 137 aaKnown RBP7.01□□□□□ -1.29
HDAC3-202ENST00000459727 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 LOC102724200A0A096LPH7 203 aaPredicted RBP7□□□□□ -1.29
HDAC3-202ENST00000459727 HSBP1L1C9JCN9 74 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 NDUFB8O95169 186 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 IL4P05112 153 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 IGLC3P0DOY3 106 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 SRSF2Q01130 221 aaKnown RBP7□□□□□ -1.29
HDAC3-202ENST00000459727 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 PRNTQ86SH4 94 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 DTX2Q86UW9 622 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 ZNF491Q8N8L2 437 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 LINC01560Q8TB33 94 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 ATP6V0BQ99437 205 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 ST20Q9HBF5 79 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 C21orf62Q9NYP8 219 aa7□□□□□ -1.29
HDAC3-202ENST00000459727 DIDO1Q9BTC0 2240 aaKnown RBP6.99□□□□□ -1.29
HDAC3-202ENST00000459727 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 IGLV2-11P01706 119 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 FRMD6-AS1P0C7T7 363 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 FAM106CPP0CH98 169 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 BMI1P35226 326 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 HES1Q14469 280 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 KLK9Q2XQG4 91 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 PSMG4Q5JS54 123 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 C11orf71Q6IPW1 123 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 PET117Q6UWS5 81 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 Q6ZN92 141 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 TCF24Q7RTU0 167 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 GTSF1Q8WW33 167 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 PGLYRP4Q96LB8 373 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 KLK9Q9UKQ9 250 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 PSG8Q9UQ74 426 aa6.99□□□□□ -1.29
HDAC3-202ENST00000459727 SH2D7A6NKC9 451 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-202ENST00000459727 LINC00614P0C842 121 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 RNF224P0DH78 156 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 FOSL1P15407 271 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 LINC01559Q495D7 138 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 Q56UQ5 140 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 GDF5OSQ5U4N7 250 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 VMO1Q7Z5L0 202 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 Q8N6K4 173 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 ZNF414Q96IQ9 312 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 PMCHL2Q9BQD1 86 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 MS4A6AQ9H2W1 248 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 LPAR2Q9HBW0 351 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 CLEC5AQ9NY25 188 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms