RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 RPS25P62851 125 aaKnown RBP3.99□□□□□ -1.77
USP49-205ENST00000448078 FOXI2Q6ZQN5 318 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 GPR141Q7Z602 305 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 LGALS14Q8TCE9 139 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 TMEM70Q9BUB7 260 aa3.99□□□□□ -1.77
USP49-205ENST00000448078 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
USP49-205ENST00000448078 K7EP13 123 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 MFNGO00587 321 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SIVA1O15304 175 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 CLN5O75503 358 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 WBP4O75554 376 aaKnown RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 DUSP14O95147 198 aaKnown RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 PPYP01298 95 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 M6PRP20645 277 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 CALRP27797 417 aaKnown RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 TSPOP30536 169 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 OR10A3P58181 314 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 FXYD4P59646 89 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SPHARQ15513 63 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 HES5Q5TA89 166 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 ETFRF1Q6IPR1 90 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 LPCAT3Q6P1A2 487 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 C16orf54Q6UWD8 224 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SIGLEC15Q6ZMC9 328 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SLC35G3Q8N808 338 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 RXFP4Q8TDU9 374 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 APH1BQ8WW43 257 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 CYGBQ8WWM9 190 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 PYDC1Q8WXC3 89 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 TMEM203Q969S6 136 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 IGF2BP2-AS1Q96M15 143 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 LINC01587Q99440 93 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 UPK3BQ9BT76 320 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SAV1Q9H4B6 383 aaPredicted RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 ACOT13Q9NPJ3 140 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 RPRMQ9NS64 109 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 SCN3BQ9NY72 215 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 KLK11Q9UBX7 282 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 NSG2Q9Y328 171 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 RRP15Q9Y3B9 282 aaKnown RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 TIMM8BQ9Y5J9 83 aaPredicted RBP3.98□□□□□ -1.77
USP49-205ENST00000448078 LRP1BQ9NZR2 4599 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
USP49-205ENST00000448078 IGKV1D-8A0A087WSZ0 117 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 H3BNG1 76 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 PSCAO43653 123 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 INSP01308 110 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 FABP1P07148 127 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 HSMCR30P0CW71 290 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 RD3LP0DJH9 198 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 MYL9P24844 172 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 PSMB9P28065 219 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 G6PCP35575 357 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 OPRK1P41145 380 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 RPL5P46777 297 aaKnown RBP3.97□□□□□ -1.77
USP49-205ENST00000448078 PSMB3P49720 205 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 RORCP51449 518 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 PPP5CP53041 499 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 LINC00315P59091 139 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 EIF4EBP1Q13541 118 aaPredicted RBP3.97□□□□□ -1.77
USP49-205ENST00000448078 GAMTQ14353 236 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 INSL4Q14641 139 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 TMEM69Q5SWH9 247 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 ZNF493Q6ZR52 646 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 AHSA2Q719I0 299 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 TMEM256Q8N2U0 113 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 DHRSXQ8N5I4 330 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 BEST4Q8NFU0 473 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 OR1S2Q8NGQ3 325 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 OR4X1Q8NH49 305 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 FCGR1BQ92637 280 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 PPP1R14BQ96C90 147 aa3.97□□□□□ -1.77
USP49-205ENST00000448078 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
USP49-205ENST00000448078 TRAV26-1A0A087WT03 109 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 ISLRO14498 428 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 PGLYRP1O75594 196 aaPredicted RBP3.96□□□□□ -1.78
USP49-205ENST00000448078 SLC25A4P12235 298 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 HTN1P15515 57 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 EVI2AP22794 236 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 ETV6P41212 452 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 MEOX2P50222 304 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 YPEL3P61236 119 aaPredicted RBP3.96□□□□□ -1.78
USP49-205ENST00000448078 CYCSP99999 105 aaKnown RBP3.96□□□□□ -1.78
USP49-205ENST00000448078 PRCDQ00LT1 54 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 ESRGQ1W209 222 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 FAM78BQ5VT40 261 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 TMEM144Q7Z5S9 345 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 TMEM17Q86X19 198 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 C8orf59Q8N0T1 100 aaPredicted RBP3.96□□□□□ -1.78
USP49-205ENST00000448078 C16orf74Q96GX8 76 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 C8orf4Q9NR00 106 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 FAM212BQ9NTI7 297 aaPredicted RBP3.96□□□□□ -1.78
USP49-205ENST00000448078 ZNF446Q9NWS9 450 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 PSORS1C1Q9UIG5 152 aa3.96□□□□□ -1.78
USP49-205ENST00000448078 A0A087WTM6 91 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 TRAV1-2A0A0B4J238 106 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms