RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ERCC8Q13216 396 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 S100A7L2Q5SY68 101 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 GGTLC1Q9BX51 225 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 PRDM13Q9H4Q3 707 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 TRGV1A0A0A0MS02 117 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 PUSL1Q8N0Z8 303 aaKnown RBP6.97□□□□□ -1.29
PTPN3-204ENST00000446349 CFPP27918 469 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 MUC21Q5SSG8 566 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 RHPN1-AS1Q9BWJ2 59 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 F8VVB4 439 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 F8VWA3 439 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 IGKV1D-17A0A075B6S4 117 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 NPIPB5A8MRT5 1133 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 HGFACQ04756 655 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 MRPL27Q9P0M9 148 aaKnown RBP6.97□□□□□ -1.29
PTPN3-204ENST00000446349 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.29
PTPN3-204ENST00000446349 LDLRAD4O15165 306 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 CBLN1P23435 193 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 KLRD1Q13241 179 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 IGFL2Q6UWQ7 119 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 A8MWV9 139 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 ACTL10Q5JWF8 245 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 TREML4Q6UXN2 200 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 PAQR4Q8N4S7 273 aaPredicted RBP6.96□□□□□ -1.29
PTPN3-204ENST00000446349 GLMPQ8WWB7 406 aa6.96□□□□□ -1.29
PTPN3-204ENST00000446349 C1QTNF9P0C862 333 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-204ENST00000446349 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 BRD3OSQ6XYD6 125 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 CD24P25063 80 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 DAD1P61803 113 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 TMEM14EPQ6UXP3 125 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 TEX43Q6ZNM6 134 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 ZNF319Q9P2F9 582 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 DENND4AQ7Z401 1863 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 NBASA2RRP1 2371 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 PMS2P5A8MQ11 134 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 FBLN7Q53RD9 439 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 IGKV1-12A0A0C4DH73 117 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 IGKV1D-12P01611 117 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 LINC00614P0C842 121 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-204ENST00000446349 SLX1AQ9BQ83 275 aa6.96□□□□□ -1.3
PTPN3-204ENST00000446349 F8WEM9 126 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 ATP5G3P48201 142 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 LY6G6FQ5SQ64 297 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 LAIR2Q6ISS4 152 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 SH2D6Q7Z4S9 175 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 CHTOPQ9Y3Y2 248 aaKnown RBP6.95□□□□□ -1.3
PTPN3-204ENST00000446349 GRIFINA4D1Z8 144 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 ADAMTS9Q9P2N4 1935 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 ZNF833PQ6ZTB9 187 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 IFITM3Q01628 133 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 RNF152Q8N8N0 203 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 JPT2Q9H910 190 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 IGLV3-9A0A075B6K5 115 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 LY6G6EA0A0G2JKS1 128 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
PTPN3-204ENST00000446349 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 TRPT1Q86TN4 253 aaKnown RBP6.95□□□□□ -1.3
PTPN3-204ENST00000446349 U3KQA8 63 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 EML6Q6ZMW3 1958 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 RPL35AP18077 110 aaKnown RBP6.95□□□□□ -1.3
PTPN3-204ENST00000446349 IL17DQ8TAD2 202 aa6.95□□□□□ -1.3
PTPN3-204ENST00000446349 LOC102724200A0A096LPH7 203 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-204ENST00000446349 A0A0A6YYD4 124 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 LINC00469Q8N7U9 141 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 TMEM256Q8N2U0 113 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 TDGF1P3P51864 188 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 TMEM75Q8N9X5 138 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 SPXQ9BT56 116 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 HOXA3O43365 443 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-204ENST00000446349 RNF126Q9BV68 326 aa6.94□□□□□ -1.3
PTPN3-204ENST00000446349 FAM231BA6NCW3 169 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 DNAJC30Q96LL9 226 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 ATP6V0BQ99437 205 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 SHANK2-AS3Q9BTD1 123 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 CST9LQ9H4G1 147 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 EDA2RQ9HAV5 297 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 FCN3O75636 299 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 DKK4Q9UBT3 224 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 MUC6Q6W4X9 2439 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 IGKV1-27A0A075B6S5 117 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 IGHV2-70P01814 119 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 IGKCP01834 107 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 GATA2P23769 480 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-204ENST00000446349 AGMATQ9BSE5 352 aa6.93□□□□□ -1.3
PTPN3-204ENST00000446349 TCRAP04437 139 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms