RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.91
CTCFL-209ENST00000433949 ASPHD1Q5U4P2 390 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
CTCFL-209ENST00000433949 SHANK2-AS3Q9BTD1 123 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 Q9H3A6 140 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 A0A096LNT2 108 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 SMIM27A0A1W2PRY6 76 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
CTCFL-209ENST00000433949 H3BRN7 92 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 TGFAP01135 160 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 SAA4P35542 130 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 OR8I2Q8N0Y5 310 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 ZNF491Q8N8L2 437 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 Q8N9W7 124 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 GPR82Q96P67 336 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 HIF1ANQ9NWT6 349 aa9.39□□□□□ -0.91
CTCFL-209ENST00000433949 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 MSMBP08118 114 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 S100A7P31151 101 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 FCGR2BP31994 310 aaPredicted RBP9.38□□□□□ -0.91
CTCFL-209ENST00000433949 NDPQ00604 133 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 OR4F17Q8NGA8 305 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 LINC00479Q96M42 142 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 TXN2Q99757 166 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
CTCFL-209ENST00000433949 IGHV7-81A0A0B4J1V7 117 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 NPFFO15130 113 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 TCRAP04437 139 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 IL4P05112 153 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 SERTAD4Q9NUC0 356 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 B4DSR2 109 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
CTCFL-209ENST00000433949 LEMD1Q68G75 181 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 PRSS57Q6UWY2 283 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
CTCFL-209ENST00000433949 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
CTCFL-209ENST00000433949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTCFL-209ENST00000433949 TRAV34A0A0B4J273 112 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 SNURFLB1AK76 121 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 AMBPP02760 352 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 ADMP35318 185 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 GNG5P63218 68 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 PAX8Q06710 450 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 PDE6HQ13956 83 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 Q56UQ5 140 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-209ENST00000433949 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 GRAMD2BQ96HH9 432 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 C7orf69Q9H7B7 122 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 LTAP01374 205 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 CBLN1P23435 193 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 IER3P46695 156 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 LOXL1Q08397 574 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-209ENST00000433949 LINC00469Q8N7U9 141 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 FAM110DQ8TAY7 271 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-209ENST00000433949 FOXC2Q99958 501 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 GSN-AS1Q9NRJ2 163 aa9.36□□□□□ -0.91
CTCFL-209ENST00000433949 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 CENPVL3A0A0U1RRI6 287 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 K7EQM0 130 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-209ENST00000433949 CT83Q5H943 113 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 NUDT10Q8NFP7 164 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 NUDT11Q96G61 164 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 AMY1AP04745 511 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 SNRPCP09234 159 aaKnown RBP9.35□□□□□ -0.91
CTCFL-209ENST00000433949 IGLC2P0DOY2 106 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 CRISP2P16562 243 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 USF2Q15853 346 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-209ENST00000433949 GBGT1Q8N5D6 347 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 TMUB1Q9BVT8 246 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
CTCFL-209ENST00000433949 SONP18583 2426 aaKnown RBP9.34□□□□□ -0.91
CTCFL-209ENST00000433949 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-209ENST00000433949 AVPP01185 164 aa9.34□□□□□ -0.91
CTCFL-209ENST00000433949 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
CTCFL-209ENST00000433949 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-209ENST00000433949 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
CTCFL-209ENST00000433949 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-209ENST00000433949 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms