RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-207ENST00000433762 RPH3ALQ9UNE2 315 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 RAXQ9Y2V3 346 aa10.82□□□□□ -0.68
COL6A3-207ENST00000433762 NPIPB5A8MRT5 1133 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 PLGLAQ15195 96 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 Q6ZN92 141 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 CFHR4Q92496 578 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 SPENQ96T58 3664 aaKnown RBP10.81□□□□□ -0.68
COL6A3-207ENST00000433762 OOSP1A8MZH6 123 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 CHEK1O14757 476 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
COL6A3-207ENST00000433762 RIGQ13278 110 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 FAM120AOSQ5T036 256 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
COL6A3-207ENST00000433762 RP1L1Q8IWN7 2480 aaPredicted RBP10.81□□□□□ -0.68
COL6A3-207ENST00000433762 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.8□□□□□ -0.68
COL6A3-207ENST00000433762 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 GPR6P46095 362 aaPredicted RBP10.8□□□□□ -0.68
COL6A3-207ENST00000433762 C1orf122Q6ZSJ8 110 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 COX8CQ7Z4L0 72 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 ZNF491Q8N8L2 437 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 GOLT1BQ9Y3E0 138 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 TIMM23O14925 209 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 CNIH1O95406 144 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 HLA-DRB1P01911 266 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 COX7A1P24310 79 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 TSPOP30536 169 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 PSG3Q16557 428 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 LEMD1Q68G75 181 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
COL6A3-207ENST00000433762 OVOL3O00110 214 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 S100A7P31151 101 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
COL6A3-207ENST00000433762 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 IGHV3-21A0A0B4J1V1 117 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 SGK494Q96LW2 274 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 GSX1Q9H4S2 264 aaPredicted RBP10.79□□□□□ -0.68
COL6A3-207ENST00000433762 ZFHX4Q86UP3 3567 aa10.79□□□□□ -0.68
COL6A3-207ENST00000433762 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 PRTN3P24158 256 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 G0S2P27469 103 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 UCNP55089 124 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 CCDC144NLQ6NUI1 221 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 NEU4Q8WWR8 484 aaPredicted RBP10.78□□□□□ -0.68
COL6A3-207ENST00000433762 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
COL6A3-207ENST00000433762 IGLV11-55A0A075B6I3 123 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.68
COL6A3-207ENST00000433762 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 LEPROTL1O95214 131 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 C5orf64Q2M2E5 130 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 PRR30Q53SZ7 412 aaPredicted RBP10.77□□□□□ -0.68
COL6A3-207ENST00000433762 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 ONECUT1Q9UBC0 465 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 PKDREJQ9NTG1 2253 aa10.77□□□□□ -0.68
COL6A3-207ENST00000433762 APELAP0DMC3 54 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 FCGR2BP31994 310 aaPredicted RBP10.77□□□□□ -0.69
COL6A3-207ENST00000433762 MFAP4P55083 255 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 PSG9Q00887 426 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 Q56UQ5 140 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 LCN12Q6JVE5 192 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 TTC9CQ8N5M4 171 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 ORAOV1Q8WV07 137 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 POLEQ07864 2286 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 ROS1P08922 2347 aa10.77□□□□□ -0.69
COL6A3-207ENST00000433762 A6NNC1 897 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 EBI3Q14213 229 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 THYN1Q9P016 225 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 IGF2RP11717 2491 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 IGLL1P15814 213 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 KLK9Q2XQG4 91 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 MINOS1Q5TGZ0 78 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 MINOS1-NBL1R4GNA1 71 aa10.76□□□□□ -0.69
COL6A3-207ENST00000433762 PCNX1Q96RV3 2341 aa10.75□□□□□ -0.69
COL6A3-207ENST00000433762 OR4C46A6NHA9 309 aa10.75□□□□□ -0.69
COL6A3-207ENST00000433762 LYNX1G3V0Z9 82 aa10.75□□□□□ -0.69
COL6A3-207ENST00000433762 H3BTX0 84 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms