RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 A0A0G2JMZ2 1700 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 LRRC37A2A6NM11 1700 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 TET1Q8NFU7 2136 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 IGKV1D-17A0A075B6S4 117 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 RNASE2P10153 161 aaKnown RBP10.42□□□□□ -0.74
LDB3-205ENST00000429277 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 DOCK6Q96HP0 2047 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 QRFPP83859 136 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 SS18Q15532 418 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 FAM90A2PQ658T7 463 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 MEGF9Q9H1U4 602 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 LYL1P12980 280 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 C11orf44Q8N8P7 122 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 LY6G5BQ8NDX9 201 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 ZNF562Q6V9R5 426 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 SIGMAR1Q99720 223 aa10.42□□□□□ -0.74
LDB3-205ENST00000429277 LOC105371267A0A1B0GV96 52 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 FCN3O75636 299 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 UBE2E1P51965 193 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 KIF26BQ2KJY2 2108 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 CHD5Q8TDI0 1954 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
LDB3-205ENST00000429277 LEPROTO15243 131 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 FAM110DQ8TAY7 271 aaPredicted RBP10.41□□□□□ -0.74
LDB3-205ENST00000429277 C15orf62A8K5M9 175 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 CFPP27918 469 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 LINC00473A8K010 186 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 COLCA2A8K830 154 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 GLRX5Q86SX6 157 aa10.41□□□□□ -0.74
LDB3-205ENST00000429277 NTF4P34130 210 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
LDB3-205ENST00000429277 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
LDB3-205ENST00000429277 Q8TCH9 128 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 GATD1Q8NB37 220 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 CSTL1Q9H114 145 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
LDB3-205ENST00000429277 MDC1Q14676 2089 aaKnown RBP10.4□□□□□ -0.74
LDB3-205ENST00000429277 CACNA1EQ15878 2313 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 TRAV3A0A0B4J244 114 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 PSCAO43653 123 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 C1orf194Q5T5A4 169 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 NCR2O95944 276 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 ZNF492Q9P255 531 aa10.4□□□□□ -0.74
LDB3-205ENST00000429277 CACNA1DQ01668 2161 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 LCTP09848 1927 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 NEGR1Q7Z3B1 354 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 Q86TA4 180 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 MESP1Q9BRJ9 268 aa10.4□□□□□ -0.75
LDB3-205ENST00000429277 SAA4P35542 130 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 GATA4P43694 442 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 ZNF474Q6S9Z5 364 aaPredicted RBP10.39□□□□□ -0.75
LDB3-205ENST00000429277 HAPLN4Q86UW8 402 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 ANAPC13Q9BS18 74 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 MSMBP08118 114 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 LIME1Q9H400 295 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 CXCL1P09341 107 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 CT83Q5H943 113 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 BCL6BQ8N143 479 aaPredicted RBP10.39□□□□□ -0.75
LDB3-205ENST00000429277 IL17RELQ6ZVW7 336 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 TMEM75Q8N9X5 138 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 BPESC1Q9GZL8 116 aa10.39□□□□□ -0.75
LDB3-205ENST00000429277 LAMTOR3Q9UHA4 124 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 CEP250Q9BV73 2442 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 LMO1P25800 156 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 TIMM21Q9BVV7 248 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 GVINP1Q7Z2Y8 2422 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 TMEM249Q2WGJ8 235 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 DLX4Q92988 240 aaPredicted RBP10.38□□□□□ -0.75
LDB3-205ENST00000429277 C1orf159Q96HA4 380 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 A0A0U1RRA0 63 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
LDB3-205ENST00000429277 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
LDB3-205ENST00000429277 SPAG8Q99932 426 aaPredicted RBP10.38□□□□□ -0.75
LDB3-205ENST00000429277 J3QLI3 93 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
LDB3-205ENST00000429277 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 COL8A2P25067 703 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 NDPQ00604 133 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 GUSBP1Q15486 140 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
LDB3-205ENST00000429277 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 SDK2Q58EX2 2172 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 K7ENP7 123 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 IGFL3Q6UXB1 125 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 E7EQL1 145 aa10.37□□□□□ -0.75
LDB3-205ENST00000429277 TMEM158Q8WZ71 300 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms