RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 HSD52Q0P140 79 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 DEFB104AQ8WTQ1 72 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 SUPT4H1P63272 117 aaKnown RBP14.97□□□□□ -0.01
HCG11-201ENST00000411553 ARHGEF17Q96PE2 2063 aaPredicted RBP14.97□□□□□ -0.01
HCG11-201ENST00000411553 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.97□□□□□ -0.01
HCG11-201ENST00000411553 TRAV1-1A0A0B4J248 108 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 ZNF479Q96JC4 524 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 GREB1LQ9C091 1923 aaPredicted RBP14.97□□□□□ -0.01
HCG11-201ENST00000411553 A8MWV9 139 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 RASL11AQ6T310 242 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 LYPD1Q8N2G4 141 aa14.97□□□□□ -0.01
HCG11-201ENST00000411553 DAZ1Q9NQZ3 744 aaKnown RBP14.97□□□□□ -0.01
HCG11-201ENST00000411553 C6orf226Q5I0X4 101 aa14.96□□□□□ -0.01
HCG11-201ENST00000411553 C1orf159Q96HA4 380 aa14.96□□□□□ -0.01
HCG11-201ENST00000411553 SPOCK3Q9BQ16 436 aa14.96□□□□□ -0.01
HCG11-201ENST00000411553 MS4A6AQ9H2W1 248 aa14.96□□□□□ -0.01
HCG11-201ENST00000411553 SPAG8Q99932 426 aaPredicted RBP14.96□□□□□ -0.01
HCG11-201ENST00000411553 RFNGQ9Y644 331 aa14.96□□□□□ -0.01
HCG11-201ENST00000411553 RNF223E7ERA6 249 aa14.96□□□□□ -0.02
HCG11-201ENST00000411553 PRTN3P24158 256 aa14.96□□□□□ -0.02
HCG11-201ENST00000411553 MEGF9Q9H1U4 602 aa14.96□□□□□ -0.02
HCG11-201ENST00000411553 CEP250Q9BV73 2442 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 C5orf63A6NC05 138 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 IGFL4Q6B9Z1 124 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 E7EQL1 145 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 C14orf178Q8N769 122 aaPredicted RBP14.95□□□□□ -0.02
HCG11-201ENST00000411553 SYNJ2BPP57105 145 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 HGFACQ04756 655 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 NDUFAF3Q9BU61 184 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 CSTL1Q9H114 145 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 OVOL3O00110 214 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 GATA3P23771 443 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 KLHDC3Q9BQ90 382 aa14.95□□□□□ -0.02
HCG11-201ENST00000411553 RPP25LQ8N5L8 163 aaKnown RBP14.94□□□□□ -0.02
HCG11-201ENST00000411553 THADAQ6YHU6 1953 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 F8WEM9 126 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 NTF4P34130 210 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 TRBV24-1A0A075B6N3 115 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 MSMBP08118 114 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 LINC01551Q86U37 167 aa14.94□□□□□ -0.02
HCG11-201ENST00000411553 SRSF8Q9BRL6 282 aaKnown RBP14.94□□□□□ -0.02
HCG11-201ENST00000411553 PDCD11Q14690 1871 aaKnown RBP14.94□□□□□ -0.02
HCG11-201ENST00000411553 DEFB130BP0DP73 79 aa14.93□□□□□ -0.02
HCG11-201ENST00000411553 DEFB130AP0DP74 79 aa14.93□□□□□ -0.02
HCG11-201ENST00000411553 LAMTOR3Q9UHA4 124 aa14.93□□□□□ -0.02
HCG11-201ENST00000411553 TNFSF13O75888 250 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 SS18Q15532 418 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 C5orf24Q7Z6I8 188 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 GLRX5Q86SX6 157 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 A0A1B0GW64 132 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 Q5PR19 223 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 PRR31Q5SQ13 230 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 CYTL1Q9NRR1 136 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 SAMD5Q5TGI4 173 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 RUSC1-AS1Q66K80 236 aa14.92□□□□□ -0.02
HCG11-201ENST00000411553 A0A0G2JMZ2 1700 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 LRRC37A2A6NM11 1700 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 DOCK6Q96HP0 2047 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 K7ENP7 123 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 RNASE2P10153 161 aaKnown RBP14.91□□□□□ -0.02
HCG11-201ENST00000411553 DEFB131AP59861 70 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 NUP35Q8NFH5 326 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 LY96Q9Y6Y9 160 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 NYNRINQ9P2P1 1898 aaKnown RBP14.91□□□□□ -0.02
HCG11-201ENST00000411553 RPRMLQ8N4K4 120 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 GREB1Q4ZG55 1949 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 TRAV13-1A0A0B4J241 112 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 DMRTC2Q8IXT2 367 aaPredicted RBP14.91□□□□□ -0.02
HCG11-201ENST00000411553 HIST1H2BLQ99880 126 aa14.91□□□□□ -0.02
HCG11-201ENST00000411553 A0A087WWL8 130 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 CXCL1P09341 107 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 UBE2E1P51965 193 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 LCTP09848 1927 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 KIF26BQ2KJY2 2108 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 CACNA1DQ01668 2161 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 CACNA1GO43497 2377 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 INS-IGF2F8WCM5 200 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 LINC00205P59089 165 aa14.9□□□□□ -0.02
HCG11-201ENST00000411553 C15orf62A8K5M9 175 aa14.89□□□□□ -0.03
HCG11-201ENST00000411553 TRAV8-1A0A0A6YYK1 113 aa14.89□□□□□ -0.03
HCG11-201ENST00000411553 LGALS1P09382 135 aaKnown RBP14.89□□□□□ -0.03
HCG11-201ENST00000411553 Q6ZS49 121 aa14.89□□□□□ -0.03
HCG11-201ENST00000411553 FOXL2NBQ6ZUU3 175 aa14.89□□□□□ -0.03
HCG11-201ENST00000411553 MYMXA0A1B0GTQ4 84 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 PRR30Q53SZ7 412 aaPredicted RBP14.88□□□□□ -0.03
HCG11-201ENST00000411553 SHANK2-AS3Q9BTD1 123 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 LEPROTO15243 131 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 IGKV1-16P04430 117 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 RNF144BQ7Z419 303 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 UBE2CO00762 179 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 TMEM158Q8WZ71 300 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 FNDC10F2Z333 226 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 LINC01619G3V211 115 aa14.88□□□□□ -0.03
HCG11-201ENST00000411553 ZNF562Q6V9R5 426 aa14.87□□□□□ -0.03
HCG11-201ENST00000411553 LIME1Q9H400 295 aa14.87□□□□□ -0.03
HCG11-201ENST00000411553 CNOT1A5YKK6 2376 aaKnown RBP14.87□□□□□ -0.03
HCG11-201ENST00000411553 QRFPP83859 136 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms