RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 PDE6HQ13956 83 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 LINC00477Q96M19 166 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 DPH3P1Q9H4G8 78 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 Q9UFV3 132 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 TRAV40A0A0B4J280 105 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 FAM231BA6NCW3 169 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 TRAV8-1A0A0A6YYK1 113 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 PRR31Q5SQ13 230 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 CFAP161Q6P656 301 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 MPDZO75970 2070 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 A0A087X0K7 114 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 WISP1O95388 367 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 MLANAQ16655 118 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 CT83Q5H943 113 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 TMEM238C9JI98 176 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 ZNF524Q96C55 264 aa13.57□□□□□ -0.24
TSC2-204ENST00000401874 ZNF474Q6S9Z5 364 aaPredicted RBP13.56□□□□□ -0.24
TSC2-204ENST00000401874 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
TSC2-204ENST00000401874 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 PLXNA2O75051 1894 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 NDUFS8O00217 210 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 PRB4P10163 310 aaPredicted RBP13.56□□□□□ -0.24
TSC2-204ENST00000401874 TDGF1P13385 188 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 PROK2Q9HC23 129 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 ERG28Q9UKR5 140 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
TSC2-204ENST00000401874 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
TSC2-204ENST00000401874 IGKV1-39P01597 117 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 IGKV1D-39P04432 117 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 Q8TAT8 98 aa13.56□□□□□ -0.24
TSC2-204ENST00000401874 EREGO14944 169 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 CD33P20138 364 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 CEP290O15078 2479 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 CD5LO43866 347 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 IGLV3-1P01715 115 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 TMEM75Q8N9X5 138 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 SPTA1P02549 2419 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 Q5PR19 223 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 LYPD2Q6UXB3 125 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
TSC2-204ENST00000401874 TRAV8-4A0A0B4J246 113 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 Q6ZS92 163 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 LINC00479Q96M42 142 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 C3orf36Q3SXR2 165 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 CACNA1DQ01668 2161 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 THADAQ6YHU6 1953 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 IGKV3D-20A0A0C4DH25 116 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 GATA4P43694 442 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 Q8TCH9 128 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 TMEM158Q8WZ71 300 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
TSC2-204ENST00000401874 AMN1Q8IY45 258 aa13.54□□□□□ -0.24
TSC2-204ENST00000401874 VCYO14598 125 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 IL15RAQ13261 267 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 FAM223BA6NKX1 122 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 DSCR9P59020 149 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 FAM223AQ8IWN6 122 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 GHRHP01286 108 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 TMEM95Q3KNT9 176 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 IGHV2-70P01814 119 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 FXYD7P58549 80 aa13.53□□□□□ -0.24
TSC2-204ENST00000401874 KIR3DS1Q14943 382 aa13.52□□□□□ -0.24
TSC2-204ENST00000401874 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.24
TSC2-204ENST00000401874 SRD5A1P18405 259 aa13.52□□□□□ -0.24
TSC2-204ENST00000401874 MORN3Q6PF18 240 aaPredicted RBP13.52□□□□□ -0.24
TSC2-204ENST00000401874 ZNF833PQ6ZTB9 187 aa13.52□□□□□ -0.24
TSC2-204ENST00000401874 USMG5Q96IX5 58 aa13.52□□□□□ -0.24
TSC2-204ENST00000401874 WIPF3A6NGB9 483 aa13.52□□□□□ -0.25
TSC2-204ENST00000401874 TMEM155Q4W5P6 130 aa13.52□□□□□ -0.25
TSC2-204ENST00000401874 M0R2P5 195 aa13.52□□□□□ -0.25
TSC2-204ENST00000401874 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.25
TSC2-204ENST00000401874 FAM231DQ6ZW35 169 aa13.52□□□□□ -0.25
TSC2-204ENST00000401874 SRRM4A7MD48 611 aaKnown RBP13.51□□□□□ -0.25
TSC2-204ENST00000401874 ATXN8Q156A1 80 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 WDR86Q86TI4 376 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 NAA38Q9BRA0 125 aaKnown RBP13.51□□□□□ -0.25
TSC2-204ENST00000401874 TMEM219Q86XT9 240 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 ANAPC13Q9BS18 74 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 COX11Q9Y6N1 276 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 A0A1W2PRX2 142 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 ARMS2P0C7Q2 107 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 CYYR1Q96J86 154 aa13.51□□□□□ -0.25
TSC2-204ENST00000401874 ZC2HC1BQ5TFG8 222 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 V9GYV3 84 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 WFDC12Q8WWY7 111 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 LYPD6BQ8NI32 183 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 PRTN3P24158 256 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 U3KQA8 63 aa13.5□□□□□ -0.25
TSC2-204ENST00000401874 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms