RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 GNG5P63218 68 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 LYPD1Q8N2G4 141 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 ZFHX3Q15911 3703 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 CELSR1Q9NYQ6 3014 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
CLIP4-203ENST00000401617 TRBV7-1A0A0A6YYK4 115 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 H3BTX0 84 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 SLC17A3O00476 420 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 TCRAP04437 139 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 TRGC1P0CF51 173 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 ERVFC1-1P60608 527 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 BAGE2Q86Y30 109 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 OR4F17Q8NGA8 305 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 PITPNC1Q9UKF7 332 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 ABCA12Q86UK0 2595 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 HOXA5P20719 270 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 RPL15P61313 204 aaKnown RBP9.53□□□□□ -0.88
CLIP4-203ENST00000401617 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 PDE6HQ13956 83 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 LY6EQ16553 131 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 SIGLEC15Q6ZMC9 328 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
CLIP4-203ENST00000401617 RNASE7Q9H1E1 156 aaKnown RBP9.53□□□□□ -0.88
CLIP4-203ENST00000401617 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 FSHBP01225 129 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 CLEC3BP05452 202 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 PPIFP30405 207 aaKnown RBP9.52□□□□□ -0.89
CLIP4-203ENST00000401617 GPR183P32249 361 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 ACTL10Q5JWF8 245 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 MBD6Q96DN6 1003 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 C17orf77Q96MU5 243 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
CLIP4-203ENST00000401617 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 TGFAP01135 160 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 LTAP01374 205 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 RPEL1Q2QD12 228 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 TOMM20LQ6UXN7 152 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 GPR82Q96P67 336 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 RABAC1Q9UI14 185 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 H3BUA1 57 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 BMPR1BO00238 502 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 MGST1P10620 155 aaKnown RBP9.51□□□□□ -0.89
CLIP4-203ENST00000401617 UBE2G1P62253 170 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 ATP5G2Q06055 141 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
CLIP4-203ENST00000401617 PRSS57Q6UWY2 283 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 EXOC3-AS1Q8N2X6 119 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 CSMD2Q7Z408 3487 aa9.51□□□□□ -0.89
CLIP4-203ENST00000401617 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 RPL7P18124 248 aaKnown RBP9.5□□□□□ -0.89
CLIP4-203ENST00000401617 S100A7P31151 101 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 LINC00518Q8N0U6 118 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 MAPK1IP1LQ8NDC0 245 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 MS4A10Q96PG2 267 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 NDUFA6P56556 154 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 BLCAPP62952 87 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 Q5PR19 223 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 C9orf139Q6ZV77 190 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 ARL6IP6Q8N6S5 226 aa9.5□□□□□ -0.89
CLIP4-203ENST00000401617 CLPSL1A2RUU4 121 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
CLIP4-203ENST00000401617 AKR1D1P51857 326 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 LINC00527Q9UJ94 153 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 APCP25054 2843 aa9.49□□□□□ -0.89
CLIP4-203ENST00000401617 ZNF253O75346 499 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 PLA2G2AP14555 144 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 RAB9AP51151 201 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 Q6ZS46 218 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 CREBBPQ92793 2442 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 TRGV3P03979 118 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 IER3P46695 156 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 CFHR3Q02985 330 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 COA6Q5JTJ3 125 aaKnown RBP9.48□□□□□ -0.89
CLIP4-203ENST00000401617 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
CLIP4-203ENST00000401617 Q86TA4 180 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms