RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 S4R3C0 116 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 NUPR1O60356 82 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 SPINK4O60575 86 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 S100A7P31151 101 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 PAFAH1B2P68402 229 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 SLC35B1P78383 322 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 Q86TA4 180 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 ARL6IP6Q8N6S5 226 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 SGK494Q96LW2 274 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
MKS1-203ENST00000393120 PIEZO1Q92508 2521 aa11.18□□□□□ -0.62
MKS1-203ENST00000393120 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 MRPL54Q6P161 138 aaKnown RBP11.17□□□□□ -0.62
MKS1-203ENST00000393120 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 NEU1Q99519 415 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 ZFP30Q9Y2G7 519 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 A0A1B0GUS0 222 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 A8MWL6 223 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 K7EQM0 130 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 IGHV1-69P01742 117 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 LINC00310P59036 64 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 LINC00322Q6ZN03 302 aaPredicted RBP11.17□□□□□ -0.62
MKS1-203ENST00000393120 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 ZNF502Q8TBZ5 544 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
MKS1-203ENST00000393120 ABCA1O95477 2261 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 PKD1L2Q7Z442 2459 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 P01737 135 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 APCSP02743 223 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
MKS1-203ENST00000393120 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
MKS1-203ENST00000393120 MEGF9Q9H1U4 602 aa11.16□□□□□ -0.62
MKS1-203ENST00000393120 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
MKS1-203ENST00000393120 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 BMPR1BO00238 502 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
MKS1-203ENST00000393120 RAB4BP61018 213 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 CLEC2AQ6UVW9 174 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 SERF1AO75920 110 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 TPPP2P59282 170 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 PKIAP61925 76 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 PSG9Q00887 426 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 RABAC1Q9UI14 185 aa11.15□□□□□ -0.62
MKS1-203ENST00000393120 TRAV8-1A0A0A6YYK1 113 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 ZNF253O75346 499 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 CRIP2P52943 208 aaPredicted RBP11.14□□□□□ -0.63
MKS1-203ENST00000393120 PSG3Q16557 428 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 PRNTQ86SH4 94 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
MKS1-203ENST00000393120 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 ATP5J2P56134 94 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 RHOGP84095 191 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 MS4A10Q96PG2 267 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 PSG8Q9UQ74 426 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 MOB4Q9Y3A3 225 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 RAB9AP51151 201 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
MKS1-203ENST00000393120 CIARTQ8N365 385 aaPredicted RBP11.13□□□□□ -0.63
MKS1-203ENST00000393120 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
MKS1-203ENST00000393120 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
MKS1-203ENST00000393120 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 ZNF785A8K8V0 405 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 CLEC3BP05452 202 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 PAX1P15863 534 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 COL8A1P27658 744 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 SLAQ13239 276 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 KIAA1644Q3SXP7 199 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
MKS1-203ENST00000393120 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
MKS1-203ENST00000393120 TSTD3H0UI37 97 aa11.11□□□□□ -0.63
MKS1-203ENST00000393120 SRIP30626 198 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms