RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LTAP01374 205 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 UNQ5815/PRO19632Q6UWF5 114 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 ZNF492Q9P255 531 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 CELSR2Q9HCU4 2923 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 PCP4L1A6NKN8 68 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 FABP4P15090 132 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 NUDT10Q8NFP7 164 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 NUDT11Q96G61 164 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 HSPB9Q9BQS6 159 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 TMUB1Q9BVT8 246 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 C7orf69Q9H7B7 122 aa18.1■□□□□ 0.49
VPS16-201ENST00000380443 MRPS12O15235 138 aaKnown RBP18.09■□□□□ 0.49
VPS16-201ENST00000380443 CTAG1AP78358 180 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 ARL6IP6Q8N6S5 226 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 MRPL18Q9H0U6 180 aaKnown RBP18.09■□□□□ 0.49
VPS16-201ENST00000380443 PDZD11Q5EBL8 140 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 CT83Q5H943 113 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 C5orf56Q8N8D9 126 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 PACRGQ96M98 296 aaPredicted RBP18.09■□□□□ 0.49
VPS16-201ENST00000380443 ATP6V0BQ99437 205 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 MOB4Q9Y3A3 225 aa18.09■□□□□ 0.49
VPS16-201ENST00000380443 WNK2Q9Y3S1 2297 aa18.08■□□□□ 0.49
VPS16-201ENST00000380443 K7EQM0 130 aa18.08■□□□□ 0.48
VPS16-201ENST00000380443 CTSGP08311 255 aa18.08■□□□□ 0.48
VPS16-201ENST00000380443 ADMP35318 185 aa18.08■□□□□ 0.48
VPS16-201ENST00000380443 USF2Q15853 346 aaPredicted RBP18.08■□□□□ 0.48
VPS16-201ENST00000380443 TMEM18Q96B42 140 aa18.08■□□□□ 0.48
VPS16-201ENST00000380443 ATP6V0E1O15342 81 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 AMY1AP04745 511 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 CBLN1P23435 193 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 IER3P46695 156 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 PYY3Q5JQD4 70 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 NHLRC2Q8NBF2 726 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 SNRPCP09234 159 aaKnown RBP18.07■□□□□ 0.48
VPS16-201ENST00000380443 CRIP2P52943 208 aaPredicted RBP18.07■□□□□ 0.48
VPS16-201ENST00000380443 ZNF502Q8TBZ5 544 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 WIPF2Q8TF74 440 aaPredicted RBP18.07■□□□□ 0.48
VPS16-201ENST00000380443 TSKUQ8WUA8 353 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 ZNF414Q96IQ9 312 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 NAT8BQ9UHF3 227 aa18.07■□□□□ 0.48
VPS16-201ENST00000380443 NBPF19A0A087WUL8 3843 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 SERTM2A0A1B0GWG4 89 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 SNURFLB1AK76 121 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 HLA-DQA1P01909 254 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 RPL7P18124 248 aaKnown RBP18.06■□□□□ 0.48
VPS16-201ENST00000380443 RAB9AP51151 201 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 SIGLEC15Q6ZMC9 328 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 TMEM75Q8N9X5 138 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 RPH3ALQ9UNE2 315 aa18.06■□□□□ 0.48
VPS16-201ENST00000380443 AMBPP02760 352 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 GATA3P23771 443 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 PSG9Q00887 426 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 ECSCRQ19T08 205 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 RABAC1Q9UI14 185 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 ZFP30Q9Y2G7 519 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 CENPEQ02224 2701 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 ABCA1O95477 2261 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 UNC79Q9P2D8 2635 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 IGHV4-30-2A0A087WSY4 118 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 BMPR1BO00238 502 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 MSMBP08118 114 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 PRSS22Q9GZN4 317 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 ZNF331Q9NQX6 463 aaPredicted RBP18.05■□□□□ 0.48
VPS16-201ENST00000380443 S4R3C0 116 aa18.05■□□□□ 0.48
VPS16-201ENST00000380443 OR2T8A6NH00 312 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 H3BTX0 84 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 SLC25A16P16260 332 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 TMEM136Q6ZRR5 245 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 Q86TA4 180 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 AAMDCQ9H7C9 122 aa18.04■□□□□ 0.48
VPS16-201ENST00000380443 TRBV7-1A0A0A6YYK4 115 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 C19orf71A6NCJ1 209 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 FAM231BA6NCW3 169 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 RHOGP84095 191 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 Q0VG73 95 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 C15orf32Q32M92 178 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 ATP5L2Q7Z4Y8 100 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 EXOC3-AS1Q8N2X6 119 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 GBGT1Q8N5D6 347 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 EEF1AKMT3Q96AZ1 226 aa18.03■□□□□ 0.48
VPS16-201ENST00000380443 DAZAP1Q96EP5 407 aaKnown RBP18.03■□□□□ 0.48
VPS16-201ENST00000380443 RPP21Q9H633 154 aaKnown RBP18.03■□□□□ 0.48
VPS16-201ENST00000380443 SETXQ7Z333 2677 aaKnown RBP18.03■□□□□ 0.48
VPS16-201ENST00000380443 FBLL1A6NHQ2 334 aaKnown RBP18.02■□□□□ 0.48
VPS16-201ENST00000380443 A8MWL6 223 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 B4DSR2 109 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 ZNF253O75346 499 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 CRISP2P16562 243 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 PRR27Q6MZM9 219 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 OR4B1Q8NGF8 309 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 GFRA4Q9GZZ7 299 aa18.02■□□□□ 0.48
VPS16-201ENST00000380443 SOX21Q9Y651 276 aaPredicted RBP18.02■□□□□ 0.48
VPS16-201ENST00000380443 TRAV40A0A0B4J280 105 aa18.02■□□□□ 0.47
VPS16-201ENST00000380443 TCL1AP56279 114 aa18.02■□□□□ 0.47
VPS16-201ENST00000380443 GOLT1AQ6ZVE7 132 aa18.02■□□□□ 0.47
VPS16-201ENST00000380443 PIFOQ8TCI5 191 aa18.02■□□□□ 0.47
VPS16-201ENST00000380443 TRAV20A0A0B4J274 112 aa18.01■□□□□ 0.47
VPS16-201ENST00000380443 IGLV2-11P01706 119 aa18.01■□□□□ 0.47
VPS16-201ENST00000380443 P01737 135 aa18.01■□□□□ 0.47
VPS16-201ENST00000380443 ESDP10768 282 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms