RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 IGKV2-40A0A087WW87 121 aaPredicted RBP8.11□□□□□ -1.11
SPEN-201ENST00000375759 NCR2O95944 276 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 IGKV2D-40P01614 121 aaPredicted RBP8.11□□□□□ -1.11
SPEN-201ENST00000375759 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 A0A1W2PR77 199 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 TGFBR3LH3BV60 316 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 NPC2P61916 151 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 MLNRO43193 412 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 PSG3Q16557 428 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 LCN12Q6JVE5 192 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
SPEN-201ENST00000375759 IGKV1D-8A0A087WSZ0 117 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 TCRAP04437 139 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 NAA38Q9BRA0 125 aaKnown RBP8.1□□□□□ -1.11
SPEN-201ENST00000375759 A8MWP6 167 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 FNDC10F2Z333 226 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 IGLV3-12A0A075B6K2 115 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 RNASE6Q93091 150 aaKnown RBP8.1□□□□□ -1.11
SPEN-201ENST00000375759 ERCC8Q13216 396 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 TIMM21Q9BVV7 248 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 LYL1P12980 280 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 MED12LQ86YW9 2145 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 PLXNA2O75051 1894 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 ASCL4Q6XD76 172 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SPEN-201ENST00000375759 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
SPEN-201ENST00000375759 WNT2P09544 360 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 NEUROG3Q9Y4Z2 214 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 A0A1B0GWJ7 208 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 A0A087WX48 190 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 SP9P0CG40 484 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 RSPO3Q9BXY4 272 aaPredicted RBP8.09□□□□□ -1.11
SPEN-201ENST00000375759 F8WEM9 126 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 RPL36AP83881 106 aaKnown RBP8.09□□□□□ -1.11
SPEN-201ENST00000375759 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 RPL36ALQ969Q0 106 aaKnown RBP8.09□□□□□ -1.11
SPEN-201ENST00000375759 TICRRQ7Z2Z1 1910 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 TIMM23O14925 209 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 ZNF876PQ49A33 203 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 SCRT1Q9BWW7 348 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 TMEM158Q8WZ71 300 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 C9orf106Q8NAJ2 232 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 RNF5Q99942 180 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 LHFPL4Q7Z7J7 247 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 CSTL1Q9H114 145 aa8.09□□□□□ -1.11
SPEN-201ENST00000375759 SH2D1AO60880 128 aa8.09□□□□□ -1.12
SPEN-201ENST00000375759 RPL15P61313 204 aaKnown RBP8.09□□□□□ -1.12
SPEN-201ENST00000375759 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.12
SPEN-201ENST00000375759 HCFC1P51610 2035 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 C9JAW5 83 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 H3BMM0 161 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 IGLV3-19P01714 112 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 UBE2WQ96B02 151 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 GAS1P54826 345 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 TNS1Q9HBL0 1735 aaKnown RBP8.08□□□□□ -1.12
SPEN-201ENST00000375759 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
SPEN-201ENST00000375759 Q0VG73 95 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 NCOR1P1Q9H4R4 102 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
SPEN-201ENST00000375759 A0A087WV48 116 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
SPEN-201ENST00000375759 LYPD3O95274 346 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 PDE6HQ13956 83 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 C9orf139Q6ZV77 190 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 SELLP14151 372 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 CITED2Q99967 270 aaPredicted RBP8.08□□□□□ -1.12
SPEN-201ENST00000375759 COL4A1P02462 1669 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 IGHV2-26A0A0B4J1V2 119 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 TRAV41A0A0B4J266 112 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 SRRM5B3KS81 715 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 C20orf144Q9BQM9 153 aa8.08□□□□□ -1.12
SPEN-201ENST00000375759 F8W1H4 67 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 CRYGSP22914 178 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 TRBV6-6A0A0A6YYG2 114 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 SPATA31B1PQ5VZV4 182 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 RPUSD1Q9UJJ7 312 aaKnown RBP8.07□□□□□ -1.12
SPEN-201ENST00000375759 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
SPEN-201ENST00000375759 SSC4DQ8WTU2 575 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 NCOA6Q14686 2063 aaPredicted RBP8.07□□□□□ -1.12
SPEN-201ENST00000375759 CD24P25063 80 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 SRD5A1P18405 259 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 OOSP1A8MZH6 123 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 MINOS1Q5TGZ0 78 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 PLSCR4Q9NRQ2 329 aa8.07□□□□□ -1.12
SPEN-201ENST00000375759 MINOS1-NBL1R4GNA1 71 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms