RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 POU2AF1Q16633 256 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 PLA2G2FQ9BZM2 168 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 CGB1A6NKQ9 187 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 DNAL4O96015 105 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 MAGEA5P43359 124 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 TNFAIP6P98066 277 aaPredicted RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 FAM159AQ6UWV7 190 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 NEU4Q8WWR8 484 aaPredicted RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 LOXL2Q9Y4K0 774 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 NRN1LQ496H8 165 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 MYMXA0A1B0GTQ4 84 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 J3KT08 172 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 CELA2AP08217 269 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 ORMDL2Q53FV1 153 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 SPATA25Q9BR10 227 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 HAX1O00165 279 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 NDUFS7O75251 213 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 LINC00310P59036 64 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
CD28-202ENST00000374481 WISP1O95388 367 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
CD28-202ENST00000374481 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.35□□□□□ -1.07
CD28-202ENST00000374481 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 SLC22A18ASQ8N1D0 253 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 ZNRF1Q8ND25 227 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 TTTY13Q9BZ97 58 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 RNF7Q9UBF6 113 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 LAMA3Q16787 3333 aa8.35□□□□□ -1.07
CD28-202ENST00000374481 BRCA2P51587 3418 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 FABP5P3A8MUU1 101 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 GLRXP35754 106 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 TMEM240Q5SV17 173 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 FAM104BQ5XKR9 115 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 LHX8Q68G74 356 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 C1orf43Q9BWL3 253 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 FOXA2Q9Y261 457 aaPredicted RBP8.34□□□□□ -1.07
CD28-202ENST00000374481 SAA1P0DJI8 122 aaPredicted RBP8.34□□□□□ -1.07
CD28-202ENST00000374481 MLANAQ16655 118 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 PLXNA3P51805 1871 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 NPYP01303 97 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 NDUFV3P56181 108 aaKnown RBP8.34□□□□□ -1.07
CD28-202ENST00000374481 Q8N976 141 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
CD28-202ENST00000374481 DYSFO75923 2080 aa8.34□□□□□ -1.07
CD28-202ENST00000374481 TMEM213A2RRL7 107 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 M0R381 172 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 AGFG2O95081 481 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 YLPM1P49750 1951 aaKnown RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 SPINK14Q6IE38 97 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 GTSF1Q8WW33 167 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 PROCRQ9UNN8 238 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 PSPNO60542 156 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 CLPSP04118 112 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 COX7A1P24310 79 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 FAM53AQ6NSI3 398 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 MORN3Q6PF18 240 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 Q86TA4 180 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 KLF14Q8TD94 323 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 PTH2Q96A98 100 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 CCL13Q99616 98 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 TRACP01848 142 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 SAA2P0DJI9 122 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 MYOD1P15172 320 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 NUP37Q8NFH4 326 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 FNDC1Q4ZHG4 1894 aaPredicted RBP8.33□□□□□ -1.08
CD28-202ENST00000374481 CCL7P80098 99 aa8.33□□□□□ -1.08
CD28-202ENST00000374481 CENPFP49454 3210 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 HELZP42694 1942 aaKnown RBP8.32□□□□□ -1.08
CD28-202ENST00000374481 C21orf140B9A014 251 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 UFSP1Q6NVU6 142 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 TFF1P04155 84 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 SPANXDQ9BXN6 97 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 MED12LQ86YW9 2145 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 DOPEY2Q9Y3R5 2298 aa8.32□□□□□ -1.08
CD28-202ENST00000374481 ARFGEF3Q5TH69 2177 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 M0R2P5 195 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PPP1R17O96001 155 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 LTAP01374 205 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 TCF15Q12870 199 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 CHCHD2Q9Y6H1 151 aaPredicted RBP8.31□□□□□ -1.08
CD28-202ENST00000374481 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 FGF6P10767 208 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms