RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ZNF138P52744 262 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 OR9G4Q8NGQ1 327 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 F2Z2F3 143 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 UQCR10Q9UDW1 63 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 HOXA5P20719 270 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 A0A1W2PPI3 338 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 NDUFS7O75251 213 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 COTL1Q14019 142 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 WDR86Q86TI4 376 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 A0A087WX48 190 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 TEX36Q5VZQ5 186 aa11.93□□□□□ -0.5
NDC1-201ENST00000371429 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
NDC1-201ENST00000371429 PRADC1Q9BSG0 188 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 TRAV12-3A0A0B4J271 114 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 CDX1P47902 265 aaPredicted RBP11.92□□□□□ -0.5
NDC1-201ENST00000371429 FXYD7P58549 80 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 DMRTC2Q8IXT2 367 aaPredicted RBP11.92□□□□□ -0.5
NDC1-201ENST00000371429 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 TOMM40O96008 361 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 FAM110DQ8TAY7 271 aaPredicted RBP11.92□□□□□ -0.5
NDC1-201ENST00000371429 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 VGLL1Q99990 258 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 PPBPP02775 128 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 MLANAQ16655 118 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
NDC1-201ENST00000371429 HELZP42694 1942 aaKnown RBP11.92□□□□□ -0.5
NDC1-201ENST00000371429 G3V318 75 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 A0A087WWC5 75 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 C15orf62A8K5M9 175 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
NDC1-201ENST00000371429 TCRAP04437 139 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 IL17RELQ6ZVW7 336 aa11.91□□□□□ -0.5
NDC1-201ENST00000371429 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
NDC1-201ENST00000371429 CNTFRP26992 372 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 LCN12Q6JVE5 192 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 Q6ZRM9 215 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 AGMATQ9BSE5 352 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
NDC1-201ENST00000371429 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 INSP01308 110 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 DEFB131AP59861 70 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 IGFL4Q6B9Z1 124 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
NDC1-201ENST00000371429 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
NDC1-201ENST00000371429 SHISA9B4DS77 424 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
NDC1-201ENST00000371429 NCOR2Q9Y618 2525 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 GBF1Q92538 1859 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 LINC01619G3V211 115 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 CA1P00915 261 aaPredicted RBP11.89□□□□□ -0.51
NDC1-201ENST00000371429 FABP2P12104 132 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.51
NDC1-201ENST00000371429 GFI1BQ5VTD9 330 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 Q8TAT8 98 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 A8MXK9 166 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 DNAL4O96015 105 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 C17orf58Q2M2W7 97 aa11.89□□□□□ -0.51
NDC1-201ENST00000371429 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
NDC1-201ENST00000371429 TCF21O43680 179 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 NDUFB8O95169 186 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 NRN1Q9NPD7 142 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
NDC1-201ENST00000371429 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
NDC1-201ENST00000371429 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
NDC1-201ENST00000371429 IGHV3-73A0A0B4J1V6 119 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 LINC00311Q8N616 119 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 KAAG1Q9UBP8 84 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 NUP210Q8TEM1 1887 aaPredicted RBP11.87□□□□□ -0.51
NDC1-201ENST00000371429 FGF16O43320 207 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 DEFB113Q30KQ7 82 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 LYPD1Q8N2G4 141 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 ADARB2-AS1A8MUL3 147 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 NDUFA3O95167 84 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 GZMBP10144 247 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 EVI2AP22794 236 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 CD28P10747 220 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
NDC1-201ENST00000371429 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 PSG3Q16557 428 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 KLF2Q9Y5W3 355 aaPredicted RBP11.86□□□□□ -0.51
NDC1-201ENST00000371429 TTC9CQ8N5M4 171 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms