RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TRAV1-2A0A0B4J238 106 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 LYRM9A8MSI8 78 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 L7N2F9 121 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 SOCS3O14543 225 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 PDCD5O14737 125 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 CRXO43186 299 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 RNASE2P10153 161 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 GCSHP23434 173 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 RPL35P42766 123 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 TAS2R60P59551 318 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 PSG9Q00887 426 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 FAM78BQ5VT40 261 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 NRARPQ7Z6K4 114 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 BEST4Q8NFU0 473 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 ZNF431Q8TF32 576 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 SEC22AQ96IW7 307 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 LINC00052Q96N35 136 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 C7orf50Q9BRJ6 194 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 SEPSECSQ9HD40 501 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 TXNL4BQ9NX01 149 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 SSR3Q9UNL2 185 aa5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 MRPS16Q9Y3D3 137 aaKnown RBP5.78□□□□□ -1.48
HMGB1P39-201ENST00000366304 LOC100506127A0A0U1RQW1 187 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 RAB19A4D1S5 217 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 METTL21EPA6NDL7 271 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 CBY3A6NI87 242 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 BUB3O43684 328 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 SCO1O75880 301 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 IFNA5P01569 189 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 ATP5G1P05496 136 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 ATP5G3P48201 142 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 PCP4P48539 62 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 RORCP51449 518 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 ERVFC1-1P60608 527 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 RRAS2P62070 204 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 TEPPQ6URK8 271 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 SIGLEC15Q6ZMC9 328 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 FOXI2Q6ZQN5 318 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 TPRA1Q86W33 373 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 HOGA1Q86XE5 327 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 C9orf62Q8N4C0 152 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 C12orf45Q8N5I9 185 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR4X1Q8NH49 305 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMEM230Q96A57 120 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 MAGT1Q9H0U3 335 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 MIXL1Q9H2W2 232 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 FKBP11Q9NYL4 201 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 SCP2D1Q9UJQ7 156 aa5.77□□□□□ -1.49
HMGB1P39-201ENST00000366304 TRAV26-1A0A087WT03 109 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 A0A0J9YX75 114 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 A0A0J9YY99 117 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 A8MTW9 85 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 TEX46H3BTG2 121 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 NXPH3O95157 252 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 P0C879 139 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 IGLC1P0CG04 106 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 RAB3BP20337 219 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 HSPE1P61604 102 aaKnown RBP5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 DHODHQ02127 395 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 SMCO1Q147U7 214 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 SAPCD1Q5SSQ6 148 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 GPR146Q96CH1 333 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 IGF2BP2-AS1Q96M15 143 aa5.76□□□□□ -1.49
HMGB1P39-201ENST00000366304 A0A0B4J293 547 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 M0R2Z0 102 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 RPS19P39019 145 aaKnown RBP5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 RFX2P48378 723 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 PAX9P55771 341 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 RAB5BP61020 215 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 ARL6IP1Q15041 203 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 SNX29P2Q8IUI4 249 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR4C16Q8NGL9 310 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 RXFP4Q8TDU9 374 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 SFT2D1Q8WV19 159 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 GNPNAT1Q96EK6 184 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 RNF125Q96EQ8 232 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 MARVELD1Q9BSK0 173 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMEM70Q9BUB7 260 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 FXYD6Q9H0Q3 95 aa5.75□□□□□ -1.49
HMGB1P39-201ENST00000366304 MEIS3P1A6NDR6 274 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 CIDEAO60543 219 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 IGKV1-5P01602 117 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 SDC2P34741 201 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 ERHP84090 104 aaKnown RBP5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 MXD1Q05195 221 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR5I1Q13606 314 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 SPINK13Q1W4C9 94 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 BSXQ3C1V8 233 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 RNASE12Q5GAN4 147 aaKnown RBP5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 PRSS54Q6PEW0 395 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 UQCC3Q6UW78 93 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 BAP18Q8IXM2 172 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 OR4A16Q8NH70 328 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 DEFB104AQ8WTQ1 72 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 MRGPRFQ96AM1 343 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 NARS2Q96I59 477 aaKnown RBP5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 TMEM208Q9BTX3 173 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 NIT2Q9NQR4 276 aa5.74□□□□□ -1.49
HMGB1P39-201ENST00000366304 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms