RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 IDI2-AS1Q9NZ38 188 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 FAM90A26D6RGX4 464 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 PRRG2O14669 202 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 G6PCP35575 357 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 MOGAT3Q86VF5 341 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 NHP2Q9NX24 153 aaKnown RBP7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 CENPVL3A0A0U1RRI6 287 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 OR5AL1P0C617 328 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 FOXF2Q12947 444 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 SPINK9Q5DT21 86 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 SPATA46Q5T0L3 261 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 CARD19Q96LW7 228 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 FOXB1Q99853 325 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 ZNF747Q9BV97 191 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 WDR83OSQ9Y284 106 aa7.52□□□□□ -1.21
SMARCAL1-202ENST00000358207 RHODO00212 210 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 RSPO1Q2MKA7 263 aaPredicted RBP7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 TRAV5A0A0B4J249 113 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 A0A1B0GXF2 115 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 MGST3O14880 152 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 WIPF1O43516 503 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 SRD5A1P18405 259 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 NABP1Q96AH0 204 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 NGBQ9NPG2 151 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 USF3Q68DE3 2245 aa7.51□□□□□ -1.21
SMARCAL1-202ENST00000358207 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FGFRL1Q8N441 504 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 ZBTB34Q8NCN2 500 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 OR5AN1Q8NGI8 311 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM90A18PA6NE21 464 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM90A16PA6NEW6 464 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM90A8PA6NJQ4 464 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM90A9PA6NNJ1 464 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 A8MWL6 223 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 M0R135 149 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 LTAP01374 205 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 ZNF799Q96GE5 643 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 TCRBV4S1A1TA0A5B7 111 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 FNDC10F2Z333 226 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 NMUP48645 174 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 RBM11P57052 281 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 ITLN2Q8WWU7 325 aaPredicted RBP7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
SMARCAL1-202ENST00000358207 C5orf49A4QMS7 147 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 HIGD1CA8MV81 97 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 HSPB6O14558 160 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 TGFAP01135 160 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 THBDP07204 575 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 AREGP15514 252 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 C20orf204Q6ZNR8 217 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 ABHD12Q8N2K0 398 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 FASNP49327 2511 aaKnown RBP7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 NGFP01138 241 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 CSN1S1P47710 185 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 HOXA4Q00056 320 aaPredicted RBP7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 Q6ZSR3 168 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 GJC3Q8NFK1 279 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 ATP6V0E2Q8NHE4 81 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 LINC00479Q96M42 142 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 MGST2Q99735 147 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 FZR1Q9UM11 496 aa7.49□□□□□ -1.21
SMARCAL1-202ENST00000358207 CSN3P07498 182 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 FOXL2NBQ6ZUU3 175 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM169BQ8N8A8 192 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 C9orf106Q8NAJ2 232 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 TEX50A0A1B0GTY4 177 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 C15orf62A8K5M9 175 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 CFAP126Q5VTH2 177 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 PPP1R35Q8TAP8 253 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 C1orf159Q96HA4 380 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 HSD17B10Q99714 261 aaKnown RBP7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 AGRNO00468 2067 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 NPIPB6E9PJ23 425 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 IGHG4P01861 327 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 FKBP2P26885 142 aaKnown RBP7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 TREML4Q6UXN2 200 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 SSMEM1Q8WWF3 244 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 LIN7CQ9NUP9 197 aaKnown RBP7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 DUSP13Q9UII6 198 aa7.48□□□□□ -1.21
SMARCAL1-202ENST00000358207 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 GGTLC3B5MD39 225 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 CRLF1O75462 422 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 GLRXP35754 106 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 EFNB3Q15768 340 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 BORCS8Q96FH0 119 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 SETXQ7Z333 2677 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms