RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 C15orf62A8K5M9 175 aa9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 FCN3O75636 299 aa9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 WDR86Q86TI4 376 aa9.96□□□□□ -0.82
TMEM170A-201ENST00000357613 CXCL1P09341 107 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 SRSF4Q08170 494 aaKnown RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 FOXL2NBQ6ZUU3 175 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 USP9YO00507 2555 aaPredicted RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 MKI67P46013 3256 aaKnown RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 NUDT10Q8NFP7 164 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 FAM215AQ9Y5M1 114 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 A0A1B0GV90 55 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 LIME1Q9H400 295 aa9.95□□□□□ -0.82
TMEM170A-201ENST00000357613 OR10J3Q5JRS4 329 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 C1orf147Q96MC9 270 aaPredicted RBP9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 OVOL3O00110 214 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 GLRX5Q86SX6 157 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 A0A087WWC5 75 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 G3V318 75 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 MMP23AO75900 390 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 SP5Q6BEB4 398 aaPredicted RBP9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 LCNL1Q6ZST4 164 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 IGHV3-53P01767 116 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 PLP1P60201 277 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 PIP4P2Q8N4L2 257 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 IGFBPL1Q8WX77 278 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 ANKRD11Q6UB99 2663 aaPredicted RBP9.94□□□□□ -0.82
TMEM170A-201ENST00000357613 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 A0A1W2PPI3 338 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 PRSS33Q8NF86 280 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 DMRTC2Q8IXT2 367 aaPredicted RBP9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 RPL35AP18077 110 aaKnown RBP9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 ACTL10Q5JWF8 245 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 TMEM101Q96IK0 257 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 CD5P06127 495 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 FOXL1Q12952 345 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 TMEM249Q2WGJ8 235 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
TMEM170A-201ENST00000357613 TRGV4A0A0C4DH28 118 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 K7ERU9 68 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 TCRAP04437 139 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 PRTN3P24158 256 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 SYNJ2BPP57105 145 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 BRCA2P51587 3418 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 FAM90A9PA6NNJ1 464 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 ETV2O00321 342 aaPredicted RBP9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 TYMSP04818 313 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 RNASE2P10153 161 aaKnown RBP9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 HOXA5P20719 270 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 DIAPH2-AS1Q14236 149 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 Q6AWC8 147 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 ATP5LO75964 103 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 DMRT1Q9Y5R6 373 aa9.92□□□□□ -0.82
TMEM170A-201ENST00000357613 PLXNB1O43157 2135 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 ZNF138P52744 262 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 CACNG7P62955 275 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 MINOS1Q5TGZ0 78 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 MINOS1-NBL1R4GNA1 71 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 FASNP49327 2511 aaKnown RBP9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 TRBV6-6A0A0A6YYG2 114 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 ASCL4Q6XD76 172 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 TMEM170AQ8WVE7 144 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 LINC00614P0C842 121 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 TDGF1P13385 188 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 PAX1P15863 534 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 SOX21Q9Y651 276 aaPredicted RBP9.91□□□□□ -0.82
TMEM170A-201ENST00000357613 NCOA6Q14686 2063 aaPredicted RBP9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 TSKUQ8WUA8 353 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 PARD6GQ9BYG4 376 aaPredicted RBP9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 VCX2Q9H322 139 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 GSN-AS1Q9NRJ2 163 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 TPSG1Q9NRR2 321 aa9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
TMEM170A-201ENST00000357613 ATP6V0E1O15342 81 aa9.9□□□□□ -0.83
TMEM170A-201ENST00000357613 SSC4DQ8WTU2 575 aa9.9□□□□□ -0.83
TMEM170A-201ENST00000357613 CHCHD5Q9BSY4 110 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms