RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 IFI27L1Q96BM0 104 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 GAFA1Q96PS6 74 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 TIMM21Q9BVV7 248 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 CKAP5Q14008 2032 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 H0YJW9 148 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 NPC2P61916 151 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 RHODO00212 210 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 TFF1P04155 84 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 CRYGSP22914 178 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 PPIFP30405 207 aaKnown RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 THAP8Q8NA92 274 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 FAM110DQ8TAY7 271 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 TRIOBPQ9H2D6 2365 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF318Q5VUA4 2279 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 LYPD6Q86Y78 171 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 MBD3L5A6NJ08 208 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 H3BMM0 161 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 EFNB3Q15768 340 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 NIT1Q86X76 327 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 MBD3L2Q8NHZ7 208 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 GVINP1Q7Z2Y8 2422 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 CRIPAKQ8N1N5 446 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 GNB1LQ9BYB4 327 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 BPESC1Q9GZL8 116 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 IGKV1D-13A0A0B4J2D9 117 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 OVOL3O00110 214 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SH2D1AO60880 128 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SERF1AO75920 110 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 IGKV1-13P0DP09 117 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 VWC2Q2TAL6 325 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF474Q6S9Z5 364 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 LYZL4Q96KX0 146 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SRSF8Q9BRL6 282 aaKnown RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 INTS1Q8N201 2190 aaKnown RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV13-1A0A0B4J241 112 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SAA4P35542 130 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 HSD52Q0P140 79 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 TRPT1Q86TN4 253 aaKnown RBP4.53□□□□□ -1.68
PTPRD-202ENST00000356435 FAM19A2Q8N3H0 131 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 VWCEQ96DN2 955 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 PYGO2Q9BRQ0 406 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 ANAPC13Q9BS18 74 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 SELENOKQ9Y6D0 94 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 RP1P56715 2156 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 C20orf144Q9BQM9 153 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 CLDN16Q9Y5I7 305 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 CEP250Q9BV73 2442 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 QRFPP83859 136 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 LY6G5BQ8NDX9 201 aa4.53□□□□□ -1.68
PTPRD-202ENST00000356435 PLXNA3P51805 1871 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 SCN5AQ14524 2016 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 C1orf194Q5T5A4 169 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 CSTL1Q9H114 145 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 DOCK4Q8N1I0 1966 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 FAM186AA6NE01 2351 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 TCRAP04437 139 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 SELLP14151 372 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 PSG3Q16557 428 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 CD177Q8N6Q3 437 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 MDS2Q8NDY4 140 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 ZDBF2Q9HCK1 2354 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 DLEU1O43261 78 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 MMP23AO75900 390 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 UBE2E1P51965 193 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 LYPD1Q8N2G4 141 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF479Q96JC4 524 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 D6R8Y8 96 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF329Q86UD4 541 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 GGNQ86UU5 652 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM158Q8WZ71 300 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 RFNGQ9Y644 331 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 PMS2P5A8MQ11 134 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 NPIPB5A8MRT5 1133 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 ADMP35318 185 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM170AQ8WVE7 144 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 SCRT1Q9BWW7 348 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 TEX48A0A1B0GUV7 120 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 TREML4Q6UXN2 200 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF114Q8NC26 417 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 INAFM2P0DMQ5 153 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 RPL23P62829 140 aaKnown RBP4.52□□□□□ -1.69
PTPRD-202ENST00000356435 RUSC1-AS1Q66K80 236 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 LYZL1Q6UWQ5 148 aa4.52□□□□□ -1.69
PTPRD-202ENST00000356435 IGHV1-69DA0A0B4J2H0 117 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 IGHV1-69P01742 117 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 CHAC1Q9BUX1 264 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 LAMTOR2Q9Y2Q5 125 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 LMO1P25800 156 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 FOXL1Q12952 345 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 NEGR1Q7Z3B1 354 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 NCR2O95944 276 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms