RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 IL4P05112 153 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 SLC25A5P05141 298 aaKnown RBP6.82□□□□□ -1.32
LSAMP-201ENST00000333617 MSMBP08118 114 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 TRGC1P0CF51 173 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 PAX1P15863 534 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 HIST1H1BP16401 226 aaKnown RBP6.82□□□□□ -1.32
LSAMP-201ENST00000333617 MYCNOSP40205 109 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 OR5I1Q13606 314 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 UNQ5815/PRO19632Q6UWF5 114 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 S100A7AQ86SG5 101 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF491Q8N8L2 437 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 FAM110DQ8TAY7 271 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-201ENST00000333617 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 FBXL7Q9UJT9 491 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 S4R3C0 116 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 DOPEY2Q9Y3R5 2298 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 APCP25054 2843 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 H3BRN7 92 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 SLC17A3O00476 420 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 IGLV2-8P01709 118 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 S100A8P05109 93 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 MGST1P10620 155 aaKnown RBP6.82□□□□□ -1.32
LSAMP-201ENST00000333617 HOXA5P20719 270 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 GNG5P63218 68 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 ECSCRQ19T08 205 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 BRD3OSQ6XYD6 125 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 C5orf56Q8N8D9 126 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 NRGNQ92686 78 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 LINC00479Q96M42 142 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 TXN2Q99757 166 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 OSTCQ9NRP0 149 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 EPDR1Q9UM22 224 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 CSMD2Q7Z408 3487 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 TENM4Q6N022 2769 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 TRAV9-1A0A075B6T8 112 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 B4DSR2 109 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 ISLRO14498 428 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 HIST1H1EP10412 219 aaKnown RBP6.81□□□□□ -1.32
LSAMP-201ENST00000333617 SLC25A16P16260 332 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 FCGR2BP31994 310 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-201ENST00000333617 UBE2G1P62253 170 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSAMP-201ENST00000333617 TMEM183BQ1AE95 376 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 RPEL1Q2QD12 228 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 KLK9Q2XQG4 91 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 BAGE2Q86Y30 109 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 BPIFA4PQ86YQ2 179 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 C5orf17Q8NAS9 161 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 OR4F17Q8NGA8 305 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 VN1R17PQ8TDU5 208 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
LSAMP-201ENST00000333617 Q9H3A6 140 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 OTORQ9NRC9 128 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF586Q9NXT0 402 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 KLK9Q9UKQ9 250 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 RNF24Q9Y225 148 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 V9GYV3 84 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 NAV2Q8IVL1 2488 aa6.81□□□□□ -1.32
LSAMP-201ENST00000333617 CREBBPQ92793 2442 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 PRRC2AP48634 2157 aaKnown RBP6.8□□□□□ -1.32
LSAMP-201ENST00000333617 TRAV34A0A0B4J273 112 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 A1L4Q6 167 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 OR2T8A6NH00 312 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 H3BTX0 84 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 IGHV3-23P01764 117 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 S100A9P06702 114 aaKnown RBP6.8□□□□□ -1.32
LSAMP-201ENST00000333617 IGHV4-38-2P0DP08 117 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 CDX1P47902 265 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-201ENST00000333617 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
LSAMP-201ENST00000333617 IBA57Q5T440 356 aaKnown RBP6.8□□□□□ -1.32
LSAMP-201ENST00000333617 TMEM219Q86XT9 240 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 NHLRC2Q8NBF2 726 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 RPH3ALQ9UNE2 315 aa6.8□□□□□ -1.32
LSAMP-201ENST00000333617 TRAV20A0A0B4J274 112 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 SH2D7A6NKC9 451 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-201ENST00000333617 CTSGP08311 255 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 GATA3P23771 443 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 MEOX2P50222 304 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 RPL15P61313 204 aaKnown RBP6.79□□□□□ -1.32
LSAMP-201ENST00000333617 C15orf32Q32M92 178 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 CMTM2Q8TAZ6 248 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 PIFOQ8TCI5 191 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 HIF1ANQ9NWT6 349 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 PITPNC1Q9UKF7 332 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 TRAPPC1Q9Y5R8 145 aa6.79□□□□□ -1.32
LSAMP-201ENST00000333617 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms