RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 GTSCR1Q86UQ5 136 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 ZNF492Q9P255 531 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 TRBV7-9A0A0J9YWB2 115 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 MST1LQ2TV78 715 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 GZMBP10144 247 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 CFHR2P36980 270 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 FAM231BA6NCW3 169 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 IGLV3-1P01715 115 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-201ENST00000292478 RSPO3Q9BXY4 272 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-201ENST00000292478 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 TMEM8BA6NDV4 472 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 UBE2E1P51965 193 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
PTCD1-201ENST00000292478 IGKV1-16P04430 117 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 ZNF415Q09FC8 603 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 Q86TA4 180 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 LINC01356Q8N9X3 169 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 NDUFA4L2Q9NRX3 87 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 TEX36Q5VZQ5 186 aa10.37□□□□□ -0.75
PTCD1-201ENST00000292478 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-201ENST00000292478 VCYO14598 125 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 TYMSP04818 313 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 MALP21145 153 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 TSPAN13O95857 204 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 MYLKQ15746 1914 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 CT83Q5H943 113 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
PTCD1-201ENST00000292478 TICRRQ7Z2Z1 1910 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 CD33P20138 364 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 MORN3Q6PF18 240 aaPredicted RBP10.36□□□□□ -0.75
PTCD1-201ENST00000292478 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
PTCD1-201ENST00000292478 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 LINC00205P59089 165 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 Q6ZR03 302 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 LHFPL4Q7Z7J7 247 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 RTTNQ86VV8 2226 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 SAA4P35542 130 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
PTCD1-201ENST00000292478 SRRM4A7MD48 611 aaKnown RBP10.34□□□□□ -0.75
PTCD1-201ENST00000292478 PAX9P55771 341 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 Q0VG73 95 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 SRD5A1P18405 259 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 DAZ1Q9NQZ3 744 aaKnown RBP10.34□□□□□ -0.75
PTCD1-201ENST00000292478 NDUFS6O75380 124 aaKnown RBP10.34□□□□□ -0.75
PTCD1-201ENST00000292478 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 BPESC1Q9GZL8 116 aa10.34□□□□□ -0.75
PTCD1-201ENST00000292478 IGLV3-9A0A075B6K5 115 aa10.33□□□□□ -0.75
PTCD1-201ENST00000292478 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.75
PTCD1-201ENST00000292478 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 A0A1B0GV72 72 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
PTCD1-201ENST00000292478 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
PTCD1-201ENST00000292478 C1QTNF4Q9BXJ3 329 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 RSPO1Q2MKA7 263 aaPredicted RBP10.33□□□□□ -0.76
PTCD1-201ENST00000292478 WDR86Q86TI4 376 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 MDC1Q14676 2089 aaKnown RBP10.33□□□□□ -0.76
PTCD1-201ENST00000292478 SLC25A20O43772 301 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 NCR2O95944 276 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 HTN3P15516 51 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 TMEM256Q8N2U0 113 aa10.33□□□□□ -0.76
PTCD1-201ENST00000292478 PCP4P48539 62 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 FRMPD3Q5JV73 1810 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 ZNF524Q96C55 264 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 SAP30O75446 220 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 Q8NFD4 153 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 OR2K2Q8NGT1 345 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 INSP01308 110 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 PAX2Q02962 417 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 MLANAQ16655 118 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 TMEM86BQ8N661 226 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
PTCD1-201ENST00000292478 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
PTCD1-201ENST00000292478 CD300EQ496F6 205 aaPredicted RBP10.31□□□□□ -0.76
PTCD1-201ENST00000292478 CHCHD5Q9BSY4 110 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 NDPQ00604 133 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 Q8TAT8 98 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms