RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ISOC2Q96AB3 205 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 SRSF4Q08170 494 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 TBX15Q96SF7 602 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 NUP214P35658 2090 aaPredicted RBP10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 ASCC3Q8N3C0 2202 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 TRAV1-1A0A0B4J248 108 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 WDR86Q86TI4 376 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM75Q8N9X5 138 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 MEGF9Q9H1U4 602 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 CACNA1CQ13936 2221 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 LOC389332A0A1B0GUA5 103 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 ESPL1Q14674 2120 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 Q6YL49 198 aa10.72□□□□□ -0.69
PRPF38A-201ENST00000257181 LINC00473A8K010 186 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 F5H768 121 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 F8VVB4 439 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 F8VWA3 439 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 SPART-AS1P0CW21 52 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 CDKN1BP46527 198 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 PRR31Q5SQ13 230 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 NINQ8N4C6 2090 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.69
PRPF38A-201ENST00000257181 DIRC3C9JPN6 131 aa10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 H3BTX0 84 aa10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 VCYO14598 125 aa10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 EVI2AP22794 236 aa10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 C16orf74Q96GX8 76 aa10.71□□□□□ -0.7
PRPF38A-201ENST00000257181 BRWD1Q9NSI6 2320 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 A6NDX4 124 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 RNASE1P07998 156 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 CCL18P55774 89 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 C10orf55Q5SWW7 151 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 CTSZQ9UBR2 303 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 IGHG2P01859 326 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 FOLR2P14207 255 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 SLC7A5P1Q8MH63 180 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 C5orf52A6NGY3 159 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 TCRAP04437 139 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 FAM24BQ8N5W8 94 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 SEPSECSQ9HD40 501 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-201ENST00000257181 NOTCH4Q99466 2003 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 GLMPQ8WWB7 406 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 IFITM10A6NMD0 228 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 PMS2P5A8MQ11 134 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 IGKV1-5P01602 117 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 RASL10AQ92737 203 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 GFI1Q99684 422 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 MAP1BP46821 2468 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 ZNF503-AS2A6NEH8 195 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 OBSL1O75147 1896 aa10.69□□□□□ -0.7
PRPF38A-201ENST00000257181 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 OR11H2Q8NH07 326 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 GFRA4Q9GZZ7 299 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 DENND4CQ5VZ89 1909 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 NDUFS6O75380 124 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 A0A087WWC5 75 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 NDUFA7O95182 113 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 H2BFSP57053 126 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 C5orf56Q8N8D9 126 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 TSKUQ8WUA8 353 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 CKS1BP61024 79 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 ERCC8Q13216 396 aa10.68□□□□□ -0.7
PRPF38A-201ENST00000257181 H3BRN7 92 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 IFITM2Q01629 132 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 SCRT1Q9BWW7 348 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 C16orf54Q6UWD8 224 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 A0A1B0GW64 132 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 RHOHQ15669 191 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 HEATR5BQ9P2D3 2071 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 FAM231BA6NCW3 169 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 SPATA25Q9BR10 227 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 COL4A3Q01955 1670 aa10.67□□□□□ -0.7
PRPF38A-201ENST00000257181 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
PRPF38A-201ENST00000257181 CD28P10747 220 aa10.66□□□□□ -0.7
PRPF38A-201ENST00000257181 C11orf53Q8IXP5 236 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms