RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 Q6ZRM9 215 aa9□□□□□ -0.97
DCLK1-201ENST00000255448 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
DCLK1-201ENST00000255448 ACACAQ13085 2346 aa9□□□□□ -0.97
DCLK1-201ENST00000255448 CHD3Q12873 2000 aaKnown RBP9□□□□□ -0.97
DCLK1-201ENST00000255448 ASCL2Q99929 193 aa9□□□□□ -0.97
DCLK1-201ENST00000255448 PMVKQ15126 192 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 AMN1Q8IY45 258 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 FAM216BQ8N7L0 139 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 C1orf43Q9BWL3 253 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 DOCK6Q96HP0 2047 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 NCOR1O75376 2440 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 IGHV3OR16-12A0A075B7B8 117 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 EXOC3-AS1Q8N2X6 119 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 FBXL15Q9H469 300 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 TRACP01848 142 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 SNRPD3P62318 126 aaKnown RBP8.99□□□□□ -0.97
DCLK1-201ENST00000255448 DEFB104AQ8WTQ1 72 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 CACNA1GO43497 2377 aa8.99□□□□□ -0.97
DCLK1-201ENST00000255448 YPEL1O60688 119 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 YPEL2Q96QA6 119 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
DCLK1-201ENST00000255448 PF4P02776 101 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 DUTP33316 252 aaKnown RBP8.98□□□□□ -0.97
DCLK1-201ENST00000255448 HAX1O00165 279 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 NUPR1O60356 82 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 IL18BPO95998 194 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 RHOGP84095 191 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 CFAP161Q6P656 301 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 LIME1Q9H400 295 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 ZNF581Q9P0T4 197 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 SAA2-SAA4A0A096LPE2 208 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 SAA2P0DJI9 122 aaPredicted RBP8.98□□□□□ -0.97
DCLK1-201ENST00000255448 WBP1Q96G27 269 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 PDCD11Q14690 1871 aaKnown RBP8.98□□□□□ -0.97
DCLK1-201ENST00000255448 TRGV3P03979 118 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 PRCDQ00LT1 54 aa8.98□□□□□ -0.97
DCLK1-201ENST00000255448 MRAPQ8TCY5 172 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 DUX5Q96PT3 197 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 PNRC2Q9NPJ4 139 aaKnown RBP8.97□□□□□ -0.97
DCLK1-201ENST00000255448 RNASE4P34096 147 aaKnown RBP8.97□□□□□ -0.97
DCLK1-201ENST00000255448 IGKV1-27A0A075B6S5 117 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 ZIC4Q8N9L1 334 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 IGHV3OR16-10A0A075B7F0 116 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 TFF1P04155 84 aa8.97□□□□□ -0.97
DCLK1-201ENST00000255448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.97
DCLK1-201ENST00000255448 TCF15Q12870 199 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 FAM201AQ5SY85 155 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 LYPD6BQ8NI32 183 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 V9GYV3 84 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 ZC2HC1AQ96GY0 325 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 C7orf69Q9H7B7 122 aa8.96□□□□□ -0.97
DCLK1-201ENST00000255448 INTS1Q8N201 2190 aaKnown RBP8.96□□□□□ -0.97
DCLK1-201ENST00000255448 RALGAPA1Q6GYQ0 2036 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 CELA3BP08861 270 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 RPL15P61313 204 aaKnown RBP8.96□□□□□ -0.98
DCLK1-201ENST00000255448 MORN2Q502X0 79 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
DCLK1-201ENST00000255448 ARMS2P0C7Q2 107 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 C21orf62Q9NYP8 219 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 C15orf62A8K5M9 175 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 RNF125Q96EQ8 232 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 SPRR3Q9UBC9 169 aa8.96□□□□□ -0.98
DCLK1-201ENST00000255448 FAM90A9PA6NNJ1 464 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 IGKV1D-33P01593 117 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 IGKV1-33P01594 117 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 CEND1Q8N111 149 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 C8orf46Q8TAG6 207 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 PMS2P5A8MQ11 134 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 E9PQ18 207 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 CD28P10747 220 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 SRSF7Q16629 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
DCLK1-201ENST00000255448 ABCA1O95477 2261 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 LRRK1Q38SD2 2015 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 TRAV3A0A0B4J244 114 aa8.95□□□□□ -0.98
DCLK1-201ENST00000255448 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
DCLK1-201ENST00000255448 C5orf63A6NC05 138 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
DCLK1-201ENST00000255448 CFHR2P36980 270 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 PAX9P55771 341 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 HERV-K104P63124 156 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 FOXF2Q12947 444 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 GATD1Q8NB37 220 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 DOCK8Q8NF50 2099 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 SCN5AQ14524 2016 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 G3V4G9 280 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 THBDP07204 575 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 SLC25A20O43772 301 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 IGLC1P0CG04 106 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 PLEKHB2Q96CS7 222 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 SLC25A39Q9BZJ4 359 aaPredicted RBP8.94□□□□□ -0.98
DCLK1-201ENST00000255448 GREB1Q4ZG55 1949 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 PINLYPA6NC86 204 aa8.94□□□□□ -0.98
DCLK1-201ENST00000255448 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
DCLK1-201ENST00000255448 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
DCLK1-201ENST00000255448 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
DCLK1-201ENST00000255448 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms