RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 GZMBP10144 247 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 RPL15P61313 204 aaKnown RBP5.87□□□□□ -1.47
CPS1-201ENST00000233072 KLRD1Q13241 179 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 IGFL3Q6UXB1 125 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 ZCCHC24Q8N2G6 241 aaKnown RBP5.87□□□□□ -1.47
CPS1-201ENST00000233072 JPT2Q9H910 190 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 IGHV3OR16-8A0A075B7F1 116 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 NUP35Q8NFH5 326 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 PRSS46E5RG02 174 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 ZNF876PQ49A33 203 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 LINC00311Q8N616 119 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 LY6G5BQ8NDX9 201 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 RMI2Q96E14 147 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 TRAV12-3A0A0B4J271 114 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 LYNX1G3V0Z9 82 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 PSPNO60542 156 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 LYNX1P0DP58 116 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 C2orf82Q6UX34 121 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 CSTL1Q9H114 145 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 TMEM14CQ9P0S9 112 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 IGKV3D-20A0A0C4DH25 116 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
CPS1-201ENST00000233072 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 TIMM21Q9BVV7 248 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 LY6DQ14210 128 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 KLHL30-AS1Q8NEE0 82 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 LSM4Q9Y4Z0 139 aaKnown RBP5.86□□□□□ -1.47
CPS1-201ENST00000233072 SCN8AQ9UQD0 1980 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 COLCA2A8K830 154 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 CD5LO43866 347 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 TFF1P04155 84 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 LMO1P25800 156 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 TMEM258P61165 79 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 CD300EQ496F6 205 aaPredicted RBP5.86□□□□□ -1.47
CPS1-201ENST00000233072 GLRX5Q86SX6 157 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 RHPN1-AS1Q9BWJ2 59 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 TRAV8-1A0A0A6YYK1 113 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 IGHV2-70DA0A0C4DH43 119 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 E9PQ18 207 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 MSMBP08118 114 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 SRD5A1P18405 259 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 CEACAM8P31997 349 aaPredicted RBP5.86□□□□□ -1.47
CPS1-201ENST00000233072 APOC4P55056 127 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 C8orf31Q8N9H6 132 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 PSCAO43653 123 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 TRACP01848 142 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 INAFM2P0DMQ5 153 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 TEX36Q5VZQ5 186 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 ATRAIDQ6UW56 229 aa5.86□□□□□ -1.47
CPS1-201ENST00000233072 CD24P25063 80 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 Q0VG73 95 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 IGHV1-69DA0A0B4J2H0 117 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 LINC00473A8K010 186 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 NDUFA4O00483 81 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 IGHV1-69P01742 117 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 CXCL1P09341 107 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 NTF4P34130 210 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 UTF1Q5T230 341 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 TRAV3A0A0B4J244 114 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 K7ENP7 123 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 Q8N8P6 123 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 TMEM14BQ9NUH8 114 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 I3L3M4 83 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 PAX4O43316 350 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 PPIFP30405 207 aaKnown RBP5.85□□□□□ -1.47
CPS1-201ENST00000233072 POU2AF1Q16633 256 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 TMEM219Q86XT9 240 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 OR11H6Q8NGC7 330 aa5.85□□□□□ -1.47
CPS1-201ENST00000233072 A6NNC1 897 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 NDUFC2O95298 119 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 PFN1P07737 140 aaKnown RBP5.84□□□□□ -1.47
CPS1-201ENST00000233072 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 CRIM1Q9NZV1 1036 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 TSC2P49815 1807 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 H3BMM0 161 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 FCN3O75636 299 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 REG4Q9BYZ8 158 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 SAA4P35542 130 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 RBMY1FQ15415 496 aaKnown RBP5.84□□□□□ -1.47
CPS1-201ENST00000233072 C10orf55Q5SWW7 151 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 LCNL1Q6ZST4 164 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 TMEM158Q8WZ71 300 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 GTSF1LQ9H1H1 148 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 E7EQL1 145 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 RPP25LQ8N5L8 163 aaKnown RBP5.84□□□□□ -1.47
CPS1-201ENST00000233072 NDUFA4L2Q9NRX3 87 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
CPS1-201ENST00000233072 TRBV25-1A0A075B6N4 114 aa5.84□□□□□ -1.48
CPS1-201ENST00000233072 A0A087WV48 116 aa5.84□□□□□ -1.48
CPS1-201ENST00000233072 H3BRN7 92 aa5.84□□□□□ -1.48
CPS1-201ENST00000233072 NCR2O95944 276 aa5.84□□□□□ -1.48
CPS1-201ENST00000233072 COL8A2P25067 703 aa5.84□□□□□ -1.48
CPS1-201ENST00000233072 BCL6BQ8N143 479 aaPredicted RBP5.84□□□□□ -1.48
CPS1-201ENST00000233072 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms